Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eurytemora_20affinis_20[genbank_20GCA_5F000591075.1_202014-03-17] 6,899 sequences; 494,890,867 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq4046 82.4 8e-11 >seq4046 Length=337920 Score = 82.4 bits (90), Expect = 8e-11 Identities = 76/94 (81%), Gaps = 2/94 (2%) Strand=Plus/Plus Query 55487 AACTCCCTGCTCGTGGCGCCAATGCCAACCGCGTCGACGGCTCAGATCATGGGCAACAAC 55546 ||||| |||||| |||| || |||||||| || || || |||||||| ||||||||||| Sbjct 122590 AACTCTCTGCTCCTGGCTCCTATGCCAACAGCTTCCACTGCTCAGATTCTGGGCAACAAC 122649 Query 55547 GAG-GCGTTCGAGCCGTACACGACCAACATCTAC 55579 ||| ||| | ||| | ||||| | ||||||||| Sbjct 122650 GAGAGCG-TGGAGGCCTACACCAGTAACATCTAC 122682 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547168809460200