Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Eurytemora_20affinis_20[genbank_20GCA_5F000591075.1_202014-03-17]
6,899 sequences; 494,890,867 total letters
Query= NC_031033.1
Length=217124
Score E
Sequences producing significant alignments: (Bits) Value
seq4046 457 1e-123
>seq4046
Length=337920
Score = 457 bits (506), Expect = 1e-123
Identities = 1001/1486 (67%), Gaps = 25/1486 (2%)
Strand=Plus/Minus
Query 77154 GTGTAAATATTACTGGTATATGGTTCCACAGATTCATTGTTTCCCAAAATTTGAGCAGTA 77213
||||| || |||||||| || | ||||| || ||||| |||| ||| ||||||||
Sbjct 122684 GTGTAGATGTTACTGGTGTAGGCCTCCACGCTCTCGTTGTTGCCCAGAATCTGAGCAGTG 122625
Query 77214 GAAGCAGTTGGCATAGGTGCCACCAATAAACTATTTCTGAGACCATGTGTTCTGATTTTA 77273
||||| ||||||||||| |||| | | | || || | |||||| || || |
Sbjct 122624 GAAGCTGTTGGCATAGGAGCCAGGAGCAGAGAGTTCCTTACACCATGCTTTGCAATCTGG 122565
Query 77274 TCTTTTAGATATTTCCAATCCCAAAGATCTGAAGGTACAACATCCCAAAGATCGTATTGT 77333
| || || | |||||| || || | ||| || |||| | ||| |||||
Sbjct 122564 GCCTTCAGCTTAGCCCAATCATGGAGCTCAGTGGGTGTTACTCCCCACATATCATATTGC 122505
Query 77334 AGAATTCCGTTACTAGCATATGATCCATTATATGTTTCATAAGGTCCTTCTGTTTCAGCT 77393
|| | || | |||| | || ||| ||| |||||||||| || | || ||
Sbjct 122504 AGCCTACCCTGACTAACCGGAGAACCAGGATAGGTTTCATAAGTACCCAATTGCTCGGCA 122445
Query 77394 AGTTCACAACTCGCTTCCAATGCTCCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGA 77453
|| ||||| || ||||||| |||||||| ||||| ||||| || || | || || |||
Sbjct 122444 AGCTCACAGCTTGCTTCCAGAGCTCCGTAGTAAATAGTTTCAAAGATTTGTTTGTTTAGA 122385
Query 77454 TCTTGTGCTTCAATACTATCAAACGGATAATGTAAA-AGAATAAAGGCATCTGCTAATCC 77512
|| ||||| || || || || ||| | | ||||| | ||||| || | ||
Sbjct 122384 AGTTTAGCTTCGTTAGATTCGAATGGG-AATCTCATGAGAATGTACGCATCAGCCAGGCC 122326
Query 77513 CTGAACTCCAATACCAATAGGTCTATGTCTCTTATTGGAAATTTTA---GCTTCTGGAAT 77569
||||| ||||||||||| ||||| || | | | ||| |||| || || ||
Sbjct 122325 CTGAATACCAATACCAATTGGTCTGTGACGCATGTTGC---TTTTCCGTGCCTCCTTAAC 122269
Query 77570 AGGATAATAATTAATGTCTATAATTTTATTGAGATTTCTAACAACTACTTTAACCACGTC 77629
||||| ||||||| ||| |||||||| ||||| ||||| | || || || |
Sbjct 122268 GGGATAGTAATTAACGTCGATAATTTTGTTGAGGTTTCTGCAGGCAACCTTGGATACCTT 122209
Query 77630 CTTTAGTTTAAGAAAATCAAA--TCTTC-CATCTATAACAAACATGTTCAAAGCTATAGA 77686
||| || || || ||| | |||| || | || |||||||| | || || ||
Sbjct 122208 CTTCAGCTTCTCGAAGTCATAGGTCTTGTCAGGGTTCACGAACATGTTGACGGCAATGGA 122149
Query 77687 TGCTAGATTACAAACTGCTACCTCATTAGCGTTGGCATATTGTATTATCTCGGTACATAG 77746
||||| || || || || ||||||| || | || |||| | || || || || ||
Sbjct 122148 GGCTAGGTTGCAGACGGCCACCTCATCAGGGGCGGAGTATTCGACGATTTCTGTGCACAG 122089
Query 77747 ATTACTACATTTGATAGTGCCCAGATTTTGTTGGTTGCTCTTTTTATTGCATGAGTCCTT 77806
||| |||||||| || || ||||| || |||||| ||| | || || | ||||||
Sbjct 122088 ATTTGAGCATTTGATGGTTCCTAGATTCTGCTGGTTGGATTTTCTGTTACAGGCGTCCTT 122029
Query 77807 ATAAAGAATAAACGGAGTCCCGGTTTCAATCTGTGATTCGATAATAGATTTCCAGACGAC 77866
|| | || ||||||| ||||| ||||| || ||||| ||||||| | ||||| |
Sbjct 122028 GTACAACATGTACGGAGTTCCGGTCTCAATTTGGGATTCAATAATAGCATACCAGA-GCT 121970
Query 77867 TCT-AGCTTTTATCATAGATTTGTAT-CGCCTCTCTC--TTTCATATTGAGTATATAGCC 77922
|| |||||||| || || | ||| || || ||||||||| ||| ||
Sbjct 121969 GCTGAGCTTTTAC---AGTCTTCAAGACGCGTCCTTCCTTTTCATATTTCTCATACAGAG 121913
Query 77923 GTTCAAATTCATCTCCCCAAACATCATCCAATCCAGGGCATTCATTTGGGCACATCAATG 77982
|| || || ||||||||||| |||| | ||||||| | | | || ||||| |
Sbjct 121912 CCTCGAACTCGTCTCCCCAAACCTCATGAAGTCCAGGGGACTGGTCAGGACACATTAGAC 121853
Query 77983 ACCAGTCACCATCTTCCTTAACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAA 78042
||| || ||||| ||| || | ||||| ||||||||||| ||||| | ||| |
Sbjct 121852 TCCAATCTCCATCAGCCTCTACCCTCTTCATGAAGAGATCAGGAATCCACATAGCGTAGA 121793
Query 78043 ATAGATCTCGGGTTCTATGTTCTTCATTTCCTGTATTCTTTTTAAGATCGAGAAACTCCA 78102
| ||||| | | ||| | || || || || |||||| || | ||| | ||||| |
Sbjct 121792 ACAGATCCCTAGCTCTGTTCTCCTCTTTACCATGATTCTTCTTCAAATCCAAGAACTCGA 121733
Query 78103 TAATATCAGAATGCCATGGTTCTAGATATATTGCCATAACTCCAGGTCGTTTATTACCTC 78162
|||||| |||||| ||||| || || || || | ||||||||| ||||| ||||
Sbjct 121732 AAATATCTCCATGCCAGGGTTCAAGGTAGATAGCGAATGCTCCAGGTCTCTTATTTCCTC 121673
Query 78163 CCTGATCTATATATCTGGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTAG 78222
||||||| | ||||||||| ||||||||| | ||||||| ||| ||||| | |||||||
Sbjct 121672 CCTGATCAACATATCTGGCTGTGTTATTAAACACTCTCAGCATAGGAATCAACCCGTTAG 121613
Query 78223 ATGTTCCATTTGTTCCAGAAATATAACTTCCACTTGCGCGAATA---TTACTAATGGATA 78279
| || || ||||| | ||| || ||| || || ||| | | | || |
Sbjct 121612 AGTGACCGTTGGTTCCGGCAATGTATGACCCATGAGCACGGATACAGTGAACATTG---A 121556
Query 78280 TCCCTATTCCTCCTGCCATCTTAGATATTAGAGCGCAACGTTTCAATGTATCGTAGATAC 78339
||| || ||||| || ||| || ||||||||||| ||||||| |||||||| ||||
Sbjct 121555 GCCCGATCCCTCCGGCAGACTTGGAGATTAGAGCGCACTGTTTCAAGGTATCGTAAATAC 121496
Query 78340 CCTCTATACTGTCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAG 78399
| || ||| || ||| ||||||| || ||| || | || || | ||
Sbjct 121495 CTTCGATAGAATCCGAGGCCATAGTAAGAAGGAAGCAGGATGAAAGCTGGGGACGGGGAG 121436
Query 78400 TTCCTGCATTAAATAATGTCGGAGATGCATGCGTAAACCATTTTTCAGAAAGTAGATTGT 78459
| | || ||||||| |||||||| || || |||||| | | | ||||| |||| ||
Sbjct 121435 TAGCGGCGTTAAATAGGGTCGGAGAAGCGTGAGTAAACAGTCTCTGCGAAAGAAGATCGT 121376
Query 78460 ATGTTTCAATAGCTGATTCTATGTCCCATTGATGAATTCCTACCGCTACACGCATCAACA 78519
| |||||||| || || || || ||| | || |||||||| || || | ||||||||
Sbjct 121375 AGGTTTCAATGGCAGAGTCAATATCCTCTCCGTGGATTCCTACAGCAACTCTCATCAACA 121316
Query 78520 TATGCTGAGGTCTTTCAACCGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAG 78579
| ||||| ||||| || ||| ||| || || || |||| | ||| || | |
Sbjct 121315 TCTGCTGGGGTCTCTCCACCACCTTCTTGTTGATCTTCAGGAGGTAGCTACGCTCTAGGG 121256
Query 78580 TTTTAAAACCAAAATAGTTGTATGAAAAGTCTCTCTCGTAAATAAT 78625
| ||||| || ||||| | |||| || || | ||||||||| ||
Sbjct 121255 TCTTAAACCCGAAATACTGGTATTGGAAATCACGCTCGTAAATGAT 121210
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 694608893499360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |