Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Eurytemora_20affinis_20[genbank_20GCA_5F000591075.1_202014-03-17]
6,899 sequences; 494,890,867 total letters
Query= NC_032001.1
Length=327147
Score E
Sequences producing significant alignments: (Bits) Value
seq2112 96.9 7e-15
seq4046 86.0 1e-11
seq4668 84.2 5e-11
>seq2112
Length=2039691
Score = 96.9 bits (106), Expect = 7e-15
Identities = 86/108 (80%), Gaps = 0/108 (0%)
Strand=Plus/Plus
Query 43987 GCGTCGACATCGGAGTTGTACGGAAAGGTTCAGGAGATTCCTCAAACAGAAAGGACTCCG 44046
|| || || || ||| |||| |||||||| ||||| |||| || | ||||| |||||
Sbjct 1342002 GCTTCTACCTCTGAGCTGTATGGAAAGGTCCAGGAAGTTCCACAGAAAGAAACAACTCCA 1342061
Query 44047 TTTTATCCCCGGAGTCCATATGGTGTGGCGAAGCTATATGCCTATTGG 44094
||||||||||||||||||||||| ||||| || || | ||| || |||
Sbjct 1342062 TTTTATCCCCGGAGTCCATATGGAGTGGCTAAACTCTTTGCATACTGG 1342109
>seq4046
Length=337920
Score = 86.0 bits (94), Expect = 1e-11
Identities = 94/125 (75%), Gaps = 0/125 (0%)
Strand=Plus/Plus
Query 282888 AGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCC 282947
|| |||||||| | || |||||| ||||||||||| |||| || || | ||||||
Sbjct 168457 AGAACCAGATGAAGGGTAGATTCTTTCTGGATGTTGTAATCAGATAGAGTTCTGCCATCT 168516
Query 282948 TCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCT 283007
|| ||||||||||| ||||||||||| | || || || || || |||||||| ||
Sbjct 168517 TCAAGTTGTTTCCCAGCAAAGATCAATCTCTGCTGATCTGGGGGGATTCCCTCCTTATCC 168576
Query 283008 TGGAT 283012
| |||
Sbjct 168577 TAGAT 168581
>seq4668
Length=1644770
Score = 84.2 bits (92), Expect = 5e-11
Identities = 76/96 (79%), Gaps = 0/96 (0%)
Strand=Plus/Plus
Query 283008 TGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTC 283067
|||||||| || || ||| | ||||| | ||| ||| || || ||||| ||||| |||
Sbjct 1193275 TGGATCTTGGCCTTAACGTTTTCGATGGAGTCACTAGCCTCAACCTCGAGGGTGATGGTC 1193334
Query 283068 TTACCCGTCAAAGTCTTAACGAATATCTGCATTTTC 283103
|||||||||| |||||||| || |||||||| |||
Sbjct 1193335 TTACCCGTCAGGGTCTTAACAAAGATCTGCATGTTC 1193370
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1046646675123946
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |