Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eutreta_20diana_20[genbank_20GCA_5F001015115.1_202015-05-29] 139,046 sequences; 233,053,157 total letters Query= NC_001317.1 Length=30624 Score E Sequences producing significant alignments: (Bits) Value seq6040 98.7 2e-16 >seq6040 Length=129903 Score = 98.7 bits (108), Expect = 2e-16 Identities = 86/104 (83%), Gaps = 5/104 (5%) Strand=Plus/Minus Query 20930 AACAAAAAGGCCACTC---GAGAGAGTGGCCTAACTGTATGTATTTACTACTTAAATTTG 20986 |||||||| ||||||| | || |||||| ||| ||| ||||| | |||||||| Sbjct 118408 AACAAAAAAGCCACTCCTCGCGA-AGTGGCTTAA-TGTGCTGATTTAACAGCTAAATTTG 118351 Query 20987 GTGGCCCCTGCTGGACTTGAACCAGCGACCAAGCGATTATGAGT 21030 ||||||||| ||||||||||||||| |||||||||||||||||| Sbjct 118350 GTGGCCCCTACTGGACTTGAACCAGTGACCAAGCGATTATGAGT 118307 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 97713591283672