Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eutreta_20diana_20[genbank_20GCA_5F001015115.1_202015-05-29] 139,046 sequences; 233,053,157 total letters Query= NC_001623.1 Length=133894 Score E Sequences producing significant alignments: (Bits) Value seq119770 109 5e-19 seq123102 91.5 1e-13 >seq119770 Length=1537 Score = 109 bits (120), Expect = 5e-19 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 28959 AAAATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCC 29018 ||||||||||| ||| |||||||| | || ||||| ||||| ||| || ||| || Sbjct 1095 AAAATGCAAATTTTCGTCAAAACACTAACTGGCAAGACCATCACCTTAGAGGTGGAGCCA 1036 Query 29019 GCAGAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGAT 29078 | || || | | || | || || ||| |||||||||||| | || |||| Sbjct 1035 TCTGACACCATTGAAAATGTCAAAGCTAAGATTCAGGATAAAGAAGGTATTCCACCAGAT 976 Query 29079 CAACAAAGACTTATCTTTGCGGGCAAACAACTGGAAGATTCCAAAACTATGGCCGATTAC 29138 |||||| | ||||| || || || |||||| | |||||| ||| | |||| ||| Sbjct 975 CAACAACGTCTTATTTTCGCCGGAAAACAATTAGAAGATGGACGTACTCTATCCGACTAC 916 Query 29139 AATATTCAGAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 29188 |||||||| || ||||| || |||||| |||| || || |||| || || Sbjct 915 AATATTCAAAAAGAATCAACACTTCACCTGGTATTGCGTCTACGTGGTGG 866 >seq123102 Length=1410 Score = 91.5 bits (100), Expect = 1e-13 Identities = 148/211 (70%), Gaps = 4/211 (2%) Strand=Plus/Minus Query 28962 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 29021 ||||||||||| | ||||||||||| |||||||| || || ||| ||||| | Sbjct 816 ATGCAAATATTTGTTAAAACATTGACTGGCAAAACTATCACATTGGAAGTTGAACCTTCG 757 Query 29022 GAGACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAA 29081 || || | | | |||| ||||||| ||||| ||||| | ||| ||| ||| Sbjct 756 GATACCATCGAGAACGTTAAAGCAAAAATTCAAGATAAGGAAGGCATTCCCCCAGACCAA 697 Query 29082 CAAAGACTTATCTTTGCGGGCAAACAACTGGAAGAT--TCCAAAACTATGGCCGATTACA 29139 ||| | | || || || ||||| || || || ||| | | | ||| ||||||||| Sbjct 696 CAACGTTTAATTTTCGCCGGCAAGCAGCTTGAGGATGGACGCACATTAT--CCGATTACA 639 Query 29140 ATATTCAGAAGGAATCTACTCTTCACATGGT 29170 | ||||| |||||||| || |||||| |||| Sbjct 638 ACATTCAAAAGGAATCAACACTTCACTTGGT 608 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427610131909130