Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eutreta_20diana_20[genbank_20GCA_5F001015115.1_202015-05-29] 139,046 sequences; 233,053,157 total letters Query= NC_001962.1 Length=128413 Score E Sequences producing significant alignments: (Bits) Value seq119770 122 7e-23 seq123102 89.7 4e-13 seq88566 86.0 5e-12 >seq119770 Length=1537 Score = 122 bits (134), Expect = 7e-23 Identities = 165/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 25032 AAAATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCC 25091 ||||||||||| ||| |||||||| | || ||||| ||||| ||| || ||| || Sbjct 1095 AAAATGCAAATTTTCGTCAAAACACTAACTGGCAAGACCATCACCTTAGAGGTGGAGCCA 1036 Query 25092 GCAGAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGAT 25151 | || || | | || |||| || ||| |||||||||||| | || |||| Sbjct 1035 TCTGACACCATTGAAAATGTCAAAGCTAAGATTCAGGATAAAGAAGGTATTCCACCAGAT 976 Query 25152 CAACAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTAC 25211 |||||| | ||||| || || || |||||||| |||||| ||| | |||| ||| Sbjct 975 CAACAACGTCTTATTTTCGCCGGAAAACAATTAGAAGATGGACGTACTCTATCCGACTAC 916 Query 25212 AATATTCAAAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 25261 ||||||||||| ||||| || |||||| |||| || || |||| || || Sbjct 915 AATATTCAAAAAGAATCAACACTTCACCTGGTATTGCGTCTACGTGGTGG 866 >seq123102 Length=1410 Score = 89.7 bits (98), Expect = 4e-13 Identities = 151/213 (71%), Gaps = 8/213 (4%) Strand=Plus/Minus Query 25035 ATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCGCA 25094 ||||||||||| | ||||||||||| |||||||| || || ||| ||||| | Sbjct 816 ATGCAAATATTTGTTAAAACATTGACTGGCAAAACTATCACATTGGAAGTTGAACCTTCG 757 Query 25095 GAGACGGTGGCCGATC--TCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATC 25152 || || | | || | | ||||||||| || ||||| ||||| | ||| ||| | Sbjct 756 GATACCATCGA-GAACGTTAAAGCAAAAA-TTCAAGATAAGGAAGGCATTCCCCCAGACC 699 Query 25153 AACAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATT--CCAAAACTATGGCCGATTA 25210 ||||| | | || || || ||||| || | || ||| | | | ||| ||||||| Sbjct 698 AACAACGTTTAATTTTCGCCGGCAAGCAGCTTGAGGATGGACGCACATTAT--CCGATTA 641 Query 25211 CAATATTCAAAAGGAATCTACTCTTCACATGGT 25243 ||| |||||||||||||| || |||||| |||| Sbjct 640 CAACATTCAAAAGGAATCAACACTTCACTTGGT 608 >seq88566 Length=1870 Score = 86.0 bits (94), Expect = 5e-12 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 25033 AAATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCCG 25092 |||||||||||||| | ||||| | ||||| |||||||| || || ||||| Sbjct 458 AAATGCAAATATTCGTTAAAACCCTTACGGGTAAAACCATCACACTTGAGGTTGAACCTT 399 Query 25093 CAGAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATC 25152 | || || | | || |||| || ||| ||||| ||||| | || ||||| Sbjct 398 CCGATACTATTGAACATGTCAAAGCCAAGATTCAAGATAAGGAAGGAATTCCACCAGATC 339 Query 25153 AACAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACA 25212 | ||| | | || ||||| |||||||| ||||||| |||| ||| ||||| | Sbjct 338 AGCAACGTTTAATTTTTGCTGGCAAACAGCTGGAAGACGGACGAACTTTGGGTGATTATA 279 Query 25213 ATATTCAAAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGGG 25262 | ||||||||||||||||| | || | || || || | |||||||| Sbjct 278 ACATTCAAAAGGAATCTACGTTGCATTTAGTATTGCGTCTCAGAGGAGGG 229 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 410100654243044