Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eutreta_20diana_20[genbank_20GCA_5F001015115.1_202015-05-29] 139,046 sequences; 233,053,157 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq123102 123 2e-23 seq21876 111 1e-19 seq119770 107 2e-18 seq138766 100 2e-16 seq88566 91.5 1e-13 >seq123102 Length=1410 Score = 123 bits (136), Expect = 2e-23 Identities = 155/211 (73%), Gaps = 4/211 (2%) Strand=Plus/Plus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGT--ATCCT 118587 |||||||| | ||| || || |||||||||||||||||| ||| || |||| ||||| Sbjct 608 ACCAAGTGAAGTGTTGATTCCTTTTGAATGTTGTAATCG--GATAATGTGCGTCCATCCT 665 Query 118588 CGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTG 118647 | ||||| || || ||| | || | ||| || || || || || ||||| ||||| ||| Sbjct 666 CAAGCTGCTTGCCGGCGAAAATTAAACGTTGTTGGTCTGGGGGAATGCCTTCCTTATCTT 725 Query 118648 TAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTT 118707 ||||||| |||||| | |||| ||| |||| || || || | || | |||| Sbjct 726 GAATTTTTGCTTTAACGTTCTCGATGGTATCCGAAGGTTCAACTTCCAATGTGATAGTTT 785 Query 118708 TGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 |||| |||| ||||| ||||| || ||||| Sbjct 786 TGCCAGTCAATGTTTTAACAAATATTTGCAT 816 >seq21876 Length=2391 Score = 111 bits (122), Expect = 1e-19 Identities = 162/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569 |||| || |||| | || ||||| || | || || || || ||||||||||||||| Sbjct 740 TACCACCACGTAGACGCAGGACCAAATGAAGCGTTGATTCCTTCTGAATGTTGTAATCGG 681 Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629 || || || ||| || | || || || ||| |||| | |||||||||||| || | Sbjct 680 ACAAGGTACGGCCATCTTCCAATTGCTTGCCGGCGAAGATTAAACGCTGCTGATCTGGGG 621 Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689 | || ||||||||||| || || ||||| | ||||| |||||| | ||| | Sbjct 620 GAATTCCCTCCTTGTCCTGGATCTTAGCCTTAACGTTTTCGATGGTGTCAGACGGCTCAA 561 Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 | || | ||| | || ||||| |||| ||||||||| || || ||||| Sbjct 560 CTTCCAGGGTGATAGTCTTGCCAGTCAAAGTTTTTACGAAGATTTGCAT 512 >seq119770 Length=1537 Score = 107 bits (118), Expect = 2e-18 Identities = 161/229 (70%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569 |||| || |||| | ||| |||| ||| | ||| || ||||||||||| ||||| ||| Sbjct 864 TACCACCACGTAGACGCAATACCAGGTGAAGTGTTGATTCTTTTTGAATATTGTAGTCGG 923 Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629 | ||| || ||| || | |||||||| ||| | || ||||| || ||||| || | Sbjct 924 ATAGAGTACGTCCATCTTCTAATTGTTTTCCGGCGAAAATAAGACGTTGTTGATCTGGTG 983 Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689 | || || || || || ||| || ||| || | ||| | |||||| | ||| | Sbjct 984 GAATACCTTCTTTATCCTGAATCTTAGCTTTGACATTTTCAATGGTGTCAGATGGCTCCA 1043 Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 |||| | ||| | || ||||| || || ||||| || ||||| ||||| Sbjct 1044 CCTCTAAGGTGATGGTCTTGCCAGTTAGTGTTTTGACGAAAATTTGCAT 1092 >seq138766 Length=1258 Score = 100 bits (110), Expect = 2e-16 Identities = 164/232 (71%), Gaps = 6/232 (3%) Strand=Plus/Minus Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569 ||||||| || | |||| || | ||||||||||||||||| || || ||||||||| Sbjct 868 TACCTCCACGAAGCCTCAGAACAAGATGGATTGTAGACTCTTTCTGTATATTGTAATCG- 810 Query 118570 TCATAGTGCGCGT--ATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGG 118627 | |||| | | |||||| ||||| || ||||| |||| || | ||||||||| || Sbjct 809 -GAAAGTGTTCTTCCATCCTCAAGCTGCTTACCAGCAAAGATCAGTCTCTGCTGATCTGG 751 Query 118628 AGGTATGCCCTCCTTGT-CTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCT 118686 || || ||||| || | |||| ||||| || || | || || | || | || Sbjct 750 TGGAATCCCCTCTTTATCCTGT-ATTTTGGCCTTGACATTCTCAACATTTTCGGATGGCT 692 Query 118687 CGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 | ||||| | || | ||||| || || || |||||||| || || ||||| Sbjct 691 CCACCTCCAGTGTTATTGTTTTTCCCGTTAGTGTTTTTACGAAGATTTGCAT 640 >seq88566 Length=1870 Score = 91.5 bits (100), Expect = 1e-13 Identities = 148/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 118526 CAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATC 118585 ||| || || || | ||||| || ||||||||||| ||||| | || ||| || || Sbjct 244 CAATACTAAATGCAACGTAGATTCCTTTTGAATGTTATAATCACCCAAAGTTCGTCCGTC 303 Query 118586 CTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTC 118645 || |||||||| ||||| | || | ||| |||||||| || || || || ||||| || Sbjct 304 TTCCAGCTGTTTGCCAGCAAAAATTAAACGTTGCTGATCTGGTGGAATTCCTTCCTTATC 363 Query 118646 TGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGT 118705 | ||| || ||| || ||||| | || || | || ||||| | || | || Sbjct 364 TTGAATCTTGGCTTTGACATGTTCAATAGTATCGGAAGGTTCAACCTCAAGTGTGATGGT 423 Query 118706 TTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 ||| || || || ||||| || || || ||||| Sbjct 424 TTTACCCGTAAGGGTTTTAACGAATATTTGCAT 456 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433095220971832