Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eutreta_20diana_20[genbank_20GCA_5F001015115.1_202015-05-29] 139,046 sequences; 233,053,157 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq21876 98.7 8e-16 seq123102 84.2 2e-11 >seq21876 Length=2391 Score = 98.7 bits (108), Expect = 8e-16 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 ||||| || ||||| ||||||||||||||||| ||| || || | || ||| Sbjct 720 ACCAAATGAAGCGTTGATTCCTTCTGAATGTTGTAATCGGACAAGGTACGGCCATCTTCC 661 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 | ||| || |||||||| || || ||||| || || || || | |||||||||||| Sbjct 660 AATTGCTTGCCGGCGAAGATTAAACGCTGCTGATCTGGGGGAATTCCCTCCTTGTCCTGG 601 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || || |||||| | | | |||| ||| || |||| ||| || |||||| Sbjct 600 ATCTTAGCCTTAACGTTTTCGATGGTGTCAGACGGCTCAACTTCCAGGGTGATAGTCTTG 541 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 || |||| ||| || || ||||||||||| Sbjct 540 CCAGTCAAAGTTTTTACGAAGATTTGCAT 512 >seq123102 Length=1410 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||||||| || || ||||| ||||||||||| ||| | | ||| | || || Sbjct 608 ACCAAGTGAAGTGTTGATTCCTTTTGAATGTTGTAATCGGATAATGTGCGTCCATCCTCA 667 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || || || |||||||| || || || |||||||| || || | || ||||| || | Sbjct 668 AGCTGCTTGCCGGCGAAAATTAAACGTTGTTGGTCTGGGGGAATGCCTTCCTTATCTTGA 727 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 |||||| ||||| | | | | | ||| | || || |||| || || || ||| Sbjct 728 ATTTTTGCTTTAACGTTCTCGATGGTATCCGAAGGTTCAACTTCCAATGTGATAGTTTTG 787 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCAT 45336 || |||| || || ||||| |||||||| Sbjct 788 CCAGTCAATGTTTTAACAAATATTTGCAT 816 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 394405696429966