Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eutreta_20diana_20[genbank_20GCA_5F001015115.1_202015-05-29] 139,046 sequences; 233,053,157 total letters Query= NC_003038.1 Length=212482 Score E Sequences producing significant alignments: (Bits) Value seq139035 93.3 6e-14 >seq139035 Length=9387 Score = 93.3 bits (102), Expect = 6e-14 Identities = 169/246 (69%), Gaps = 6/246 (2%) Strand=Plus/Plus Query 35882 CTGATTCAAATGATATAtttttttGTTGAAGAAAAGAATGAAAACCCAAAACACCAATTC 35941 |||||||||| | | |||| ||| | ||| ||||||||||||| || |||| | Sbjct 6382 CTGATTCAAAAGGAACCATTTTACTTTGTAAAAATGAATGAAAACCCATCACGCCAAGAC 6441 Query 35942 CTATACTTCTTTCCTTTTTTGCCGAGTTCACCGCACGAGATAT---AGTTGGAGGTGCCT 35998 | ||||| | || || |||| || | || || ||| | |||| ||| | Sbjct 6442 CGATACTACGCTCTCTTATTGCGGAATATTTTGCTCGCTGTATTTCATTTGG---TGCTT 6498 Query 35999 TTTCTATAAAAATTGTTAAAGCATTATCCAACATTTCCATTACATCTTTTATAAAAAGAT 36058 | ||| ||| ||| ||||||| | | ||||| ||||| ||| ||||| | Sbjct 6499 GGTTTATGAAATCCTCTAATACATTATCAAGAAAACGCATTATATCTTCTATGAAAAGCT 6558 Query 36059 CGTTATCTTTCCATTCATCATAATATTCTAAATTTAAAGAAGATAAACAACAGACAGCTG 36118 | |||||||||||||| || || ||||| | ||||| || ||||||||||| ||||| | Sbjct 6559 CATTATCTTTCCATTCTTCGTAGTATTCAAGATTTACGGATGATAAACAACATACAGCAG 6618 Query 36119 TTCGTG 36124 | |||| Sbjct 6619 TGCGTG 6624 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 678632831586720