Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eutreta_20diana_20[genbank_20GCA_5F001015115.1_202015-05-29] 139,046 sequences; 233,053,157 total letters Query= NC_004002.1 Length=149955 Score E Sequences producing significant alignments: (Bits) Value seq16233 96.9 3e-15 >seq16233 Length=4334 Score = 96.9 bits (106), Expect = 3e-15 Identities = 111/146 (76%), Gaps = 9/146 (6%) Strand=Plus/Plus Query 131659 GATCCAAAAAAGATGCATAATGGAACAATAGA--ATACA-CAAGTATAGATATGCATAAC 131715 |||||||| || ||||||||||| |||||||| ||||| || || ||| |||| Sbjct 2399 GATCCAAAGAAAATGCATAATGGTACAATAGAGTATACATCACGT---GATGCCCATATG 2455 Query 131716 GGTGTATCCCCGTCTAGGCGAGGAGATTTAGAAATTTTAGGATATTGTATAATAAAATGG 131775 |||||| || ||| ||| | |||||| ||||| ||||||||| ||| || ||||| Sbjct 2456 GGTGTA---CCAACTATGCGCGCAGATTTTGAAATATTAGGATATAATATGATTGAATGG 2512 Query 131776 TTAGGCGGTAAATTGCCATGGGAAAA 131801 | ||| || |||||||||||| ||| Sbjct 2513 TCAGGTGGCCAATTGCCATGGGTAAA 2538 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478894196756400