Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eutreta_20diana_20[genbank_20GCA_5F001015115.1_202015-05-29] 139,046 sequences; 233,053,157 total letters Query= NC_004003.1 Length=149599 Score E Sequences producing significant alignments: (Bits) Value seq16233 98.7 9e-16 >seq16233 Length=4334 Score = 98.7 bits (108), Expect = 9e-16 Identities = 109/145 (75%), Gaps = 3/145 (2%) Strand=Plus/Plus Query 131360 AAACGAGATCCCAAAAAGATGCATAATGGAACAATAGAGTACACAAGTATAGATATGCAT 131419 |||| ||||| || || ||||||||||| ||||||||||| ||| ||| ||| Sbjct 2393 AAACCGGATCCAAAGAAAATGCATAATGGTACAATAGAGTATACATCACGTGATGCCCAT 2452 Query 131420 AAAGGTGTATCTCCGTCTAGGCGAGGAGATTTGGAAATTTTAGGATATTGTATAATAAAA 131479 | |||||| || ||| ||| | |||||| ||||| ||||||||| ||| || || Sbjct 2453 ATGGGTGTA---CCAACTATGCGCGCAGATTTTGAAATATTAGGATATAATATGATTGAA 2509 Query 131480 TGGTTAGGTGGTAAATTGCCATGGG 131504 |||| |||||| |||||||||||| Sbjct 2510 TGGTCAGGTGGCCAATTGCCATGGG 2534 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 477756976771440