Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eutreta_20diana_20[genbank_20GCA_5F001015115.1_202015-05-29] 139,046 sequences; 233,053,157 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq101742 96.9 5e-15 >seq101742 Length=1472 Score = 96.9 bits (106), Expect = 5e-15 Identities = 228/340 (67%), Gaps = 6/340 (2%) Strand=Plus/Minus Query 70145 GGTCAGGGTGTTGATCAATTGCAGACAA-TCATTGACACTCTCAAGACCAATCCAACAGA 70203 ||| |||| | ||||| | || |||| | ||||| || ||| || ||||||| || Sbjct 365 GGTGAGGGCATAGATCAGCTTCA-ACAAGTTATTGATACAATCAGGAATAATCCAAATGA 307 Query 70204 TAGGAGGATCGTAATGTGCTCATGGAATCCTGCAGATTTGCACCAAATGGCACTACCACC 70263 | | | || |||||| |||||||||| | ||| | | ||||||||| ||||||| Sbjct 306 TCGACGCATTATAATGTCTGCATGGAATCCGGTTGATATACCACAAATGGCATTACCACC 247 Query 70264 GTGTCACTGTTTGGCTCAGTTTTACTCGT--ACGATGGCAAATTGTCATGCTTAATGTAT 70321 |||||| ||| |||| || |||| |||| | || | | || || | |||| Sbjct 246 GTGTCATTGTCTGGCGCAATTTT--TCGTTGCTAACGGAGAGCTATCTTGTCAATTGTAC 189 Query 70322 CAGAGGAGTGCCGACATGGGCCTCGGTGTACCCTTTAACATTGCAAGCTATTCTATGTTG 70381 || | ||||| || ||||| | ||||| || || || ||||| ||| | || | Sbjct 188 CAACGTAGTGCAGATATGGGATTGGGTGTGCCATTCAATATTGCTTCCTACGCCCTGCTC 129 Query 70382 ACGCACATGATTGCTCACATTACCGGCCTGAAAGCGCACGAGTTCGTACACACCATTGGC 70441 || ||||||| || || || || || || | || || || |||||| | || Sbjct 128 ACTTACATGATCGCACATATAACTGGACTTTGTCCTGGAGACTTTGTTCACACCTTAGGT 69 Query 70442 GACGCTCACGTGTATTTAAATCACATCGAGCCATTAAAGG 70481 || |||| || ||| || |||||| || ||||| |||| Sbjct 68 GATACTCATGTCTATAAAAGTCACATTGAACCATTGAAGG 29 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 739771183530960