Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eutreta_20diana_20[genbank_20GCA_5F001015115.1_202015-05-29] 139,046 sequences; 233,053,157 total letters Query= NC_004813.1 Length=57930 Score E Sequences producing significant alignments: (Bits) Value seq13220 89.7 2e-13 >seq13220 Length=1013 Score = 89.7 bits (98), Expect = 2e-13 Identities = 177/255 (69%), Gaps = 13/255 (5%) Strand=Plus/Minus Query 10886 ATATCTTTGTTTTCCATCTCACAATTTTCCCTCTATTTAGCAAATGGATAAATACGCAAT 10945 || ||||| ||||||| | | |||||| | |||||||||| |||||||| |||| Sbjct 485 ATGTCTTTTGTTTCCATATACCGATTTTCGCACTATTTAGCAGTGTGATAAATATGCAAA 426 Query 10946 ATGATAAATTTACATTGCGGATGATTTATCAAAATGGTAAAGTTGTTCTGTGTGATAAAC 11005 |||||||| | |||| | |||||||| || | |||| |||| || || |||| | Sbjct 425 TTGATAAATACAAGTTGCAGTAAATTTATCATAAAGATAAACTTGT-CTTTGAAATAACC 367 Query 11006 G-GAGG-CACTA--ATGAGTAATGAACTACTACGCTGGCGAAAAGAGGCTTCTAGTGAGG 11061 |||| || | |||| ||| || | || || ||| |||| || || ||| | Sbjct 366 AAGAGGACAAGACCATGAATAACGATTTGCTCCGGTGGAGAAAGGAAGCCAGCTCTGATG 307 Query 11062 AATGG---AAGCGA-CTCGCCGCATTAGCGAAAACTTCAGTTGGCTATCTTGACCAGATT 11117 ||||| |||| |||||| |||| || || || ||||| || || || || || Sbjct 306 AATGGTCAAAGCTTGCTCGCC----TAGCAAATACCTCTGTTGGTTACCTCGATCAAATC 251 Query 11118 GCATATGGATTTCGA 11132 |||||||||||| || Sbjct 250 GCATATGGATTTAGA 236 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 184948513260784