Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eutreta_20diana_20[genbank_20GCA_5F001015115.1_202015-05-29] 139,046 sequences; 233,053,157 total letters Query= NC_004914.3 Length=62706 Score E Sequences producing significant alignments: (Bits) Value seq6040 109 2e-19 >seq6040 Length=129903 Score = 109 bits (120), Expect = 2e-19 Identities = 95/114 (83%), Gaps = 3/114 (3%) Strand=Plus/Plus Query 52466 GGATTAGTTACGTACCGTTATTATCCTGCGCC-CGGCCCTTTAGCTCAGT-GGTGAGAGC 52523 ||| |||||| |||||| || ||||||| || |||||| |||||||||| ||| ||||| Sbjct 118243 GGAGTAGTTAACTACCGT-ATAATCCTGCACCGCGGCCCCTTAGCTCAGTTGGTTAGAGC 118301 Query 52524 GAGCGACTCATAATCGCCAGGTCGCTGGTTCAAATCCAGCAAGGGCCACCATAT 52577 ||||||||||||||| |||| ||||||||| ||||| | ||||||||| || Sbjct 118302 ACGCGACTCATAATCGCTTGGTCACTGGTTCAAGTCCAGTAGGGGCCACCAAAT 118355 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 200194569768402