Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eutreta_20diana_20[genbank_20GCA_5F001015115.1_202015-05-29] 139,046 sequences; 233,053,157 total letters Query= NC_005083.2 Length=244834 Score E Sequences producing significant alignments: (Bits) Value seq2788 203 5e-47 >seq2788 Length=136445 Score = 203 bits (224), Expect = 5e-47 Identities = 345/495 (70%), Gaps = 14/495 (3%) Strand=Plus/Minus Query 147120 ttttATAACGCTGTTTCAAC--TCAAAAACTTTCGCTACCTACACCGATTATGGCAGGCG 147177 || ||| | || |||||||| |||| | |||| || ||||| || |||||| | |||| Sbjct 19707 TTCTATGATGCGGTTTCAACCTTCAAGA--TTTCTCTGCCTACGCCAATTATGTCCGGCG 19650 Query 147178 TTCGTACCCCGACACGTCAATTTAGCTCGTGTGTGAAAATCGAATCTGGCGACTCGCTGC 147237 | || |||||||| || || || ||||| || || ||||| | |||||| ||| Sbjct 19649 TGCGCACCCCGACTCGCCAGTTCAGCTCTTGCGTACTGATCGAGTGCGGCGACAGCCTGG 19590 Query 147238 GTTCGATCAACAAGGTATCTGAAGCTATCGTTGATTACATTAGTAAACGTGCGGGTATTG 147297 || |||||| | || || ||||| | ||| || | || || ||||| | Sbjct 19589 ACTCCATCAACGCGACCTCCAGCGCCATCGTGAAATACGTTTCACAGCGCGCAGGTATCG 19530 Query 147298 GCGTAAACGGTGGTGCAATTCGAGCAGAGGGTT---CGGTTGTACGTGCGGGTGAA--AT 147352 || | |||| ||| || || || |||| || || || | |||||| || Sbjct 19529 GCATCAACGCTGGCCGCATCCGTGCGCTGGGTAGCCCGATT---CGCGGCGGTGAAGCAT 19473 Query 147353 TCGTCACACTGGCGTAATTCCTTTCTGGAAACACTTTCAGACTGCGGTTAAATCGTGTTC 147412 || || || ||| || || |||| || ||||| ||||| ||||||||||| || || Sbjct 19472 TC--CATACCGGCTGTATCCCGTTCTATAAGCACTTCCAGACGGCGGTTAAATCCTGCTC 19415 Query 147413 TCAAGGTGGTGTACGTGGCGGTGCTGCGACTCTGACTTACCCGATCTGGCACTTAGAAGT 147472 ||| || || || || |||||||||||||| ||| |||||||| |||||| | ||||| Sbjct 19414 TCAGGGCGGCGTGCGCGGCGGTGCTGCGACCCTGTTCTACCCGATGTGGCACCTGGAAGT 19355 Query 147473 AGAAAAGCTTCTTGTTCTGAAGAACAACAAAGGTGTTGAAGAGAACCGTATTCGTCATCT 147532 |||| || || |||||||| |||||| |||||||||| ||||| ||||||| | Sbjct 19354 TGAAAGCCTGCTGGTTCTGAAAAACAACCGTGGTGTTGAAGGCAACCGCGTTCGTCACAT 19295 Query 147533 TGACTACAGCGTATCAATTAACCGATTGATGATGCAACGCCTGGTTAATAACGAGTACAT 147592 |||||| |||| || ||| | ||||| || || |||||||| || |||| Sbjct 19294 GGACTACGGCGTGCAGATCAACAAACTGATGTATCAGCGTCTGGTTAAAGGCGGCGACAT 19235 Query 147593 CACGCTATTCAGCCC 147607 ||| || |||||||| Sbjct 19234 CACTCTGTTCAGCCC 19220 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 781979294939040