Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eutreta_20diana_20[genbank_20GCA_5F001015115.1_202015-05-29] 139,046 sequences; 233,053,157 total letters Query= NC_005137.2 Length=131160 Score E Sequences producing significant alignments: (Bits) Value seq119770 91.5 1e-13 seq123102 87.8 2e-12 >seq119770 Length=1537 Score = 91.5 bits (100), Expect = 1e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 19982 CCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCC 20041 || || |||| | ||| |||| || ||||| ||||||||||| || ||||| ||| Sbjct 866 CCACCACGTAGACGCAATACCAGGTGAAGTGTTGATTCTTTTTGAATATTGTAGTCGGAT 925 Query 20042 ATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGC 20101 | ||| |||||| |||||||| || || ||||||| | |||||||| || Sbjct 926 AGAGTACGTCCATCTTCTAATTGTTTTCCGGCGAAAATAAGACGTTGTTGATCTGGTGGA 985 Query 20102 ACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTT 20161 | |||||||| || ||| || ||| || | ||| | || || ||| Sbjct 986 ATACCTTCTTTATCCTGAATCTTAGCTTTGACATTTTCAATGGTGTCAGATGGCTCCACC 1045 Query 20162 TCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCATTTT 20211 || | ||| ||||| ||||| || | |||||||| |||||||||||||| Sbjct 1046 TCTAAGGTGATGGTCTTGCCAGTTAGTGTTTTGACGAAAATTTGCATTTT 1095 >seq123102 Length=1410 Score = 87.8 bits (96), Expect = 2e-12 Identities = 147/211 (70%), Gaps = 4/211 (2%) Strand=Plus/Plus Query 20000 ACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCCATAGTTTTAG--AATCTT 20057 ||||| || ||||| ||||| ||||| |||||||||||| ||| | | | ||| | Sbjct 608 ACCAAGTGAAGTGTTGATTCCTTTTGAATGTTGTAATCG--GATAATGTGCGTCCATCCT 665 Query 20058 CCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGCACGCCTTCTTTGTCGG 20117 | | || ||||| || |||| | | ||||| || ||| | |||||| || || Sbjct 666 CAAGCTGCTTGCCGGCGAAAATTAAACGTTGTTGGTCTGGGGGAATGCCTTCCTTATCTT 725 Query 20118 CAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTTTCCACGGTAATGGTTT 20177 ||||||| ||| || | | | | ||| |||||| ||||| || || |||| Sbjct 726 GAATTTTTGCTTTAACGTTCTCGATGGTATCCGAAGGTTCAACTTCCAATGTGATAGTTT 785 Query 20178 TGCCGGTCAACGTTTTGACAAAAATTTGCAT 20208 |||| ||||| ||||| ||||| |||||||| Sbjct 786 TGCCAGTCAATGTTTTAACAAATATTTGCAT 816 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 418876157827926