Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eutreta_20diana_20[genbank_20GCA_5F001015115.1_202015-05-29] 139,046 sequences; 233,053,157 total letters Query= NC_005262.3 Length=63882 Score E Sequences producing significant alignments: (Bits) Value seq48654 89.7 2e-13 >seq48654 Length=89670 Score = 89.7 bits (98), Expect = 2e-13 Identities = 199/296 (67%), Gaps = 2/296 (1%) Strand=Plus/Minus Query 10147 GCGTAAACAAGGTAATTTTGGTTGGAAACTTAGGGGCCGATCCTGAAGTCCGTTACCTGC 10206 |||||||||| || ||| ||||||| || | || ||||| |||||||| || ||| Sbjct 37621 GCGTAAACAAAGTGATTCTGGTTGGGAATCTGGGTCAGGATCCCGAAGTCCGCTATATGC 37562 Query 10207 CGAGCGGCGACGCGGTTGCGAACATCCGTCTCGCGACGACCGATCGATACAAGGACAAGG 10266 | | ||||| || ||||| || ||| || || || | || | | ||||||| Sbjct 37561 CTAACGGCGGTGCTGTTGCCAATATCACCCTGGCAACTTCTGAAAGCTGGCGCGACAAGG 37502 Query 10267 CGAGCGGCGACATCAAGGAGGCGACTGAATGGCACCGCGTCTCGTTCTTCGGTCGGCTGG 10326 ||| |||||| || ||| ||||||||||||||||| ||| ||||| || | Sbjct 37501 CGACCGGCGAGCAGAAAGAGAAAACTGAATGGCACCGCGTTGTGTTGTTCGGCAAACTCG 37442 Query 10327 CTGAGATCGTCGACGAGCACCTGCGCAAGGGCGCATCTGTCTACATCGAGGGGCGCA-TC 10385 | || ||| | ||| ||||||| || ||| | || || || || |||||| | Sbjct 37441 CAGAAGTCGCGGGCGAATACCTGCGTAAAGGCTCTCAGGTTTATATTGA-AGGCGCACTG 37383 Query 10386 AAGACGCGGAAGTGGCAGGATCAATCCGGCCAGGATCGTTACACGACCGAGATCGT 10441 | || || |||||| ||||| |||| || ||||| ||||| ||||| Sbjct 37382 CAAACCCGTAAGTGGACCGATCAGGCCGGTGTTGAAAAATACACCACCGAAATCGT 37327 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 203951392562658