Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eutreta_20diana_20[genbank_20GCA_5F001015115.1_202015-05-29] 139,046 sequences; 233,053,157 total letters Query= NC_005357.1 Length=42493 Score E Sequences producing significant alignments: (Bits) Value seq139038 102 2e-17 >seq139038 Length=11747 Score = 102 bits (112), Expect = 2e-17 Identities = 129/175 (74%), Gaps = 2/175 (1%) Strand=Plus/Plus Query 40559 TGGAACGCAGGAAAAATCCCGCTGCTGTTCGCCCACCCGGCCAGCGCCGGCCACGGGCTG 40618 |||||| ||| || ||||| |||| || || ||||||||||||||||| ||||| || Sbjct 10602 TGGAACCAAGGGAAGATCCCTATGCTATTGGCTCACCCGGCCAGCGCCGGGCACGGCCTT 10661 Query 40619 AACCTGCAAGACGGCGG-CAACATCCTGGCTTTCTTCGGCCACTGGTGGGACTTGGAACA 40677 ||| ||||||||||||| || ||| ||||| | || | | |||| |||||||| | Sbjct 10662 AACTTGCAAGACGGCGGACACCAT-CTGGCCGTTTTTAGTGATACGTGGAACTTGGAATA 10720 Query 40678 GTACCAGCAAATCATCGAACGTATCGGCCCGACGCGCCAGGCGCAGGCCGGCCAT 40732 || ||| ||| ||||||| || || || ||| || ||||| |||||| Sbjct 10721 CTATTCGCAGATCGTCGAACGAATAGGGCCAGTGCGACAACATCAGGCGGGCCAT 10775 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 135631678478660