Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eutreta_20diana_20[genbank_20GCA_5F001015115.1_202015-05-29] 139,046 sequences; 233,053,157 total letters Query= NC_007022.1 Length=172963 Score E Sequences producing significant alignments: (Bits) Value seq12640 98.7 1e-15 seq2551 89.7 6e-13 >seq12640 Length=196862 Score = 98.7 bits (108), Expect = 1e-15 Identities = 154/219 (70%), Gaps = 6/219 (3%) Strand=Plus/Plus Query 6974 TCGCCTGGACTCAGCAACGCATGGTAAACAGCTTGGTTTGCCTGTGAACCGGAATGGGGT 7033 ||||| || ||||| ||| ||| || || ||| |||||||| ||||| || ||| Sbjct 67916 TCGCCCGGTTGCAGCAGCGCGGTGTATACCGCGAAGTTAGCCTGTGAGCCGGAGTGAGGT 67975 Query 7034 TGAACGTTTGCGAAATTGCAACTAAACAGTTCTTTAGCACGCTCAATTGCCAGGTTCT-- 7091 |||||||||||| | | || ||||| ||||| || || || || ||||| | || Sbjct 67976 TGAACGTTTGCGTAGTCAGCACCGAACAGCTCTTTCGCGCGGTCGATAGCCAGTTGCTCA 68035 Query 7092 -CGATCTCATCGGCTTTTACACAACCGCCGTAATACCGTTTGCCTGGATATCCCTCAGCA 7150 |||| ||| || | | | || || ||||| || || ||||| ||||| || || || Sbjct 68036 ACGATATCAACG---TATTCGCAGCCACCGTAGTAGCGCTTGCCCGGATAACCTTCGGCG 68092 Query 7151 TACTTGTTGGTAAAAATAGAACCTTGCGCTTTCATAACA 7189 || |||||||| | || ||||| || | ||||||| Sbjct 68093 TATTTGTTGGTCAGCTGTGAGCCTTGAGCCTGCATAACA 68131 >seq2551 Length=53185 Score = 89.7 bits (98), Expect = 6e-13 Identities = 135/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 65579 ATCTCACTTTTAAAGGGATTGTGTGAAAGTTCGCGTGATTACGTCCCGTTGTTGCTCAGG 65638 ||| | || ||| || | || || || || || || || |||||| | || || || Sbjct 37125 ATCACTCTCTTACAGCGTTTTAGTAAAGGTACGGGTAATCACGTCCTGCTGCTGTTCTTT 37066 Query 65639 AGTTAATGCATTAAAGCGTACGGCATAGCCGGAAACACGGATGGTTAGCTGGGGATATTT 65698 |||| || || |||||||| |||||||| ||||| ||||| || ||||| || |||| Sbjct 37065 GGTTAGTGAGTTGAAGCGTACCGCATAGCCTGAAACGCGGATAGTCAGCTGAGGGAATTT 37006 Query 65699 TTCTGGATTAACGATTGCATCTTCCAGGGTATTTCGGTCAAGAACATTTACGTTGAGATG 65758 || ||||| | || || || ||| | | |||| | || || ||||| ||||| Sbjct 37005 CTCAGGATTTTCCATGGCCTCCAGCAGCATCTCGCGGTTCATTACGTTAACGTTCAGATG 36946 Query 65759 CTGACCACCTTC 65770 |||||| ||||| Sbjct 36945 CTGACCGCCTTC 36934 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 552391829941680