Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eutreta_20diana_20[genbank_20GCA_5F001015115.1_202015-05-29] 139,046 sequences; 233,053,157 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq119770 122 8e-23 seq123102 96.9 3e-15 seq88566 93.3 4e-14 seq21876 82.4 7e-11 >seq119770 Length=1537 Score = 122 bits (134), Expect = 8e-23 Identities = 159/220 (72%), Gaps = 0/220 (0%) Strand=Plus/Minus Query 26758 AGTCAAACAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAAT 26817 || ||| |||||||||| | || || |||||| ||||||| || | |||||| | || Sbjct 1103 AGACAACCAAAATGCAAATTTTCGTCAAAACACTAACTGGCAAGACCATCACCTTAGAGG 1044 Query 26818 TAGAATCAAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATAC 26877 | || || |||||||| || | |||||| |||||| || |||||||| || | Sbjct 1043 TGGAGCCATCTGACACCATTGAAAATGTCAAAGCTAAGATTCAGGATAAAGAAGGTATTC 984 Query 26878 CTCCCGATCAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCA 26937 | || ||||||||| | || |||| || ||| |||||| | ||||||| | | | Sbjct 983 CACCAGATCAACAACGTCTTATTTTCGCCGGAAAACAATTAGAAGATGGACGTACTCTAT 924 Query 26938 GCGACTATAACATTCAAAAAGAATCTACTATCCATCTGGT 26977 |||||| || |||||||||||||| || | || ||||| Sbjct 923 CCGACTACAATATTCAAAAAGAATCAACACTTCACCTGGT 884 >seq123102 Length=1410 Score = 96.9 bits (106), Expect = 3e-15 Identities = 149/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| | ||||| |||||||| ||||| ||| | ||||| | ||| | ||| | Sbjct 816 ATGCAAATATTTGTTAAAACATTGACTGGCAAAACTATCACATTGGAAGTTGAACCTTCG 757 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 || ||||||||| | || ||| ||| ||| || || ||||| || || || || ||| Sbjct 756 GATACCATCGAGAACGTTAAAGCAAAAATTCAAGATAAGGAAGGCATTCCCCCAGACCAA 697 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 ||| | | |||| || |||||| || || || |||| | | | ||| || ||| Sbjct 696 CAACGTTTAATTTTCGCCGGCAAGCAGCTTGAGGATGGACGCACATTATCCGATTACAAC 637 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTG 26981 |||||||| ||||| || | || |||| ||| Sbjct 636 ATTCAAAAGGAATCAACACTTCACTTGGTTCTG 604 >seq88566 Length=1870 Score = 93.3 bits (102), Expect = 4e-14 Identities = 158/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 26767 AAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAA 26826 |||||||| | || || ||||| | || || ||| | ||||| | || | ||| | Sbjct 458 AAATGCAAATATTCGTTAAAACCCTTACGGGTAAAACCATCACACTTGAGGTTGAACCTT 399 Query 26827 ACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATC 26886 ||| || || || || |||||| |||||| || || ||||| || || || |||| Sbjct 398 CCGATACTATTGAACATGTCAAAGCCAAGATTCAAGATAAGGAAGGAATTCCACCAGATC 339 Query 26887 AACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATA 26946 | ||| | | |||| | |||||||| || ||||| | ||| | | || |||| Sbjct 338 AGCAACGTTTAATTTTTGCTGGCAAACAGCTGGAAGACGGACGAACTTTGGGTGATTATA 279 Query 26947 ACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 |||||||||| |||||||| | ||| | || || | || |||||||| Sbjct 278 ACATTCAAAAGGAATCTACGTTGCATTTAGTATTGCGTCTCAGAGGAGG 230 >seq21876 Length=2391 Score = 82.4 bits (90), Expect = 7e-11 Identities = 146/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828 |||||| | || |||||||| || ||||| || | |||||| | ||| | || | Sbjct 512 ATGCAAATCTTCGTAAAAACTTTGACTGGCAAGACTATCACCCTGGAAGTTGAGCCGTCT 571 Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888 ||||||||||| | || || ||||| ||||| || || || || || ||||| Sbjct 572 GACACCATCGAAAACGTTAAGGCTAAGATCCAGGACAAGGAGGGAATTCCCCCAGATCAG 631 Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948 || | | || | || |||||| ||| | ||||||| | | | | ||| || ||| Sbjct 632 CAGCGTTTAATCTTCGCCGGCAAGCAATTGGAAGATGGCCGTACCTTGTCCGATTACAAC 691 Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTG 26981 ||||| || ||||| || | ||| |||||||| Sbjct 692 ATTCAGAAGGAATCAACGCTTCATTTGGTCCTG 724 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 477830448849120