Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eutreta_20diana_20[genbank_20GCA_5F001015115.1_202015-05-29] 139,046 sequences; 233,053,157 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq43985 114 3e-20 >seq43985 Length=4878 Score = 114 bits (126), Expect = 3e-20 Identities = 294/443 (66%), Gaps = 6/443 (1%) Strand=Plus/Plus Query 363868 CATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAAAGAGGAATTGCGT 363927 ||||| ||||| ||||| ||| | || | |||||| || || | ||| || | Sbjct 1373 CATGCAGATATATTTGAATTTTTGGATTTAAAGAAAAATACTGGCACAGAAGAGCATAGA 1432 Query 363928 GCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAAGCGCGTGGAGGCA 363987 || | ||| | || |||||| | ||| || | || | ||||||||| || || || || Sbjct 1433 GCTAGAGATTTATTTTATGCATTATGGATTCCAGATCTTTTTATGAAACGTGTTGAAGCT 1492 Query 363988 GGTAAGAATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTCC-GATGTATGGGG 364046 | | ||||||| || | || |||||| | ||||| || ||| | || |||||||| Sbjct 1493 AATGAAGATTGGTCGCTTATGTGTCCACACAAGTGTCCCGG-CTTGCATGAGGTATGGGG 1551 Query 364047 TGACGACTATGTTGC--TCTATACGAAAAGTATGAATCGGAGGGAAAGGCTCGTAAGACA 364104 || || | || | ||||| ||| ||||| || ||| ||| ||||| | Sbjct 1552 CGATGAATTTGAAAAATTATATACTAAA--TATGAGCAAGACGGACGCGCTAATAAGAAA 1609 Query 364105 ATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGAACACCC 364164 | ||||| | || ||||||||||| || || ||||| | |||||||| ||||| Sbjct 1610 GTAAAAGCACAAAGTCTTTGGTTTGCCATTATTGAATCGCAAGTAGAGACAGGCACACCA 1669 Query 364165 TATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGTACAATT 364224 |||||| ||||||| ||| | || || | ||| || || || | |||| || ||| Sbjct 1670 TATATGCTGTACAAGGATGCATGTAATAGAAAGAGTAATCAACAAAATATTGGCACTATT 1729 Query 364225 CAGCAGAGCAACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGACTGCCGTA 364284 | || || ||||||| || || |||| || | || || || || || || Sbjct 1730 AAATGTAGTAATTTATGTACAGAAATAGTTGAGTATTCAGCACCAGATGAAGTGGCTGTT 1789 Query 364285 TGTAACCTTGCGTCGATCGCGCT 364307 ||||| | || ||||| || || Sbjct 1790 TGTAATTTAGCATCGATTGCACT 1812 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1301031640533972