Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Eutreta_20diana_20[genbank_20GCA_5F001015115.1_202015-05-29]
139,046 sequences; 233,053,157 total letters
Query= NC_007623.1
Length=211215
Score E
Sequences producing significant alignments: (Bits) Value
seq48823 118 1e-21
seq116423 96.9 5e-15
>seq48823
Length=1627
Score = 118 bits (130), Expect = 1e-21
Identities = 121/158 (77%), Gaps = 0/158 (0%)
Strand=Plus/Minus
Query 12497 TGTATTGAAGTCGATAACAGTGAACAGTTGTATTTGACCGATGACTTCATTGTGACCCAC 12556
||||||||||| ||||| || | ||| | || |||||||| || || || |||
Sbjct 1599 TGTATTGAAGTAAATAACGACGACTCGACTTATGTAACGGATGACTTTATCGTTACGCAC 1540
Query 12557 AACACGGTATCGGTTCAGGTGATTGACTTCTGGTTAACGTACATCATGGGCCGGGGGTAT 12616
||||| ||| |||||||| ||||||||||||||||||||||||||||| ||| |||
Sbjct 1539 AACACAGTAAGTGTTCAGGTCATTGACTTCTGGTTAACGTACATCATGGGGCGGTCTTAT 1480
Query 12617 ACGAGCCACTTGATTACCTTGAAGTCGGATAACCGAGC 12654
| | || |||||||| || || || |||||||| ||
Sbjct 1479 AAAACGCATTTGATTACATTAAAATCAGATAACCGGGC 1442
>seq116423
Length=1338
Score = 96.9 bits (106), Expect = 5e-15
Identities = 121/166 (73%), Gaps = 0/166 (0%)
Strand=Plus/Minus
Query 199228 TCTTCGGTGGAATGCCGAAGTTGAACAACATCAGTAACTTCAGTCGGAGTGATTTGAATA 199287
|||| ||||| ||| | ||||| || ||||| | |||||||||||| |||||||| |
Sbjct 197 TCTTTGGTGGTATGACTAAGTTAAATAACATGATTAACTTCAGTCGTGCAGATTTGAACA 138
Query 199288 ATAACAGTATTTGGAGTGCGTTAATGGGAGACCCTCGGGTTCGCCCATCTCAGTTCCAGG 199347
| | |||||| | | |||||||| |||||| || || || ||| ||| | |
Sbjct 137 AGCGTGGCATTTGGGTTCCTTTAATGGGCGACCCTAAAGTGCGACCTAATCATTTCAATG 78
Query 199348 AAATGAAGAACCTCTTCGATCTCTTTATCGATCCCATTACGAAAGA 199393
||||||| ||| | || ||||| ||||| || || || || |||||
Sbjct 77 AAATGAAAAACATGTTTGATCTGTTTATTGACCCAATCACCAAAGA 32
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 674585478438000
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |