Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eutreta_20diana_20[genbank_20GCA_5F001015115.1_202015-05-29] 139,046 sequences; 233,053,157 total letters Query= NC_007767.1 Length=132959 Score E Sequences producing significant alignments: (Bits) Value seq119770 105 6e-18 seq88566 98.7 8e-16 seq138766 89.7 4e-13 >seq119770 Length=1537 Score = 105 bits (116), Expect = 6e-18 Identities = 155/217 (71%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 115283 AAAATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCC 115342 |||||||||||||| |||||||| || || || || ||||| ||| | || |||| || Sbjct 1095 AAAATGCAAATTTTCGTCAAAACACTAACTGGCAAGACCATCACCTTAGAGGTGGAG-CC 1037 Query 115343 AGC-GACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGA 115401 | | ||||| ||| | | || ||| || ||| ||||||||||| | || || Sbjct 1036 ATCTGACACCATTGAAAATGTCAAAGCTAAGATTCAGGATAAAGAAGGTATTCCACCAGA 977 Query 115402 TCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTA 115461 ||| ||| | ||||||| || || |||||||||||||||| || | |||| || Sbjct 976 TCAACAACGTCTTATTTTCGCCGGAAAACAATTAGAAGATGGACGTACTCTATCCGACTA 917 Query 115462 TAACATTCAAAAAGAGTCTACTATACATATGGTGTTG 115498 || ||||||||||| || || | || |||| ||| Sbjct 916 CAATATTCAAAAAGAATCAACACTTCACCTGGTATTG 880 >seq88566 Length=1870 Score = 98.7 bits (108), Expect = 8e-16 Identities = 159/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 115284 AAATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCA 115343 |||||||||| || || ||||| || ||||| |||||||| || | || || | Sbjct 458 AAATGCAAATATTCGTTAAAACCCTTACGGGTAAAACCATCACACTTGAGGTTGAACCTT 399 Query 115344 GCGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATC 115403 ||| ||| ||| ||| || ||| || ||| ||||| ||||| | || |||| Sbjct 398 CCGATACTATTGAACATGTCAAAGCCAAGATTCAAGATAAGGAAGGAATTCCACCAGATC 339 Query 115404 AGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATA 115463 ||||| | | |||| ||| |||||||| | ||||| | ||| ||| ||||||| Sbjct 338 AGCAACGTTTAATTTTTGCTGGCAAACAGCTGGAAGACGGACGAACTTTGGGTGATTATA 279 Query 115464 ACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512 |||||||||| || ||||| | ||| | || ||| | | ||||||| Sbjct 278 ACATTCAAAAGGAATCTACGTTGCATTTAGTATTGCGTCTCAGAGGAGG 230 >seq138766 Length=1258 Score = 89.7 bits (98), Expect = 4e-13 Identities = 159/232 (69%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 115284 AAATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCA 115343 |||||||||| || || ||||| || ||||||||||| || || | || |||| | Sbjct 638 AAATGCAAATCTTCGTAAAAACACTAACGGGAAAAACAATAACACTGGAGGTGGAGCCAT 697 Query 115344 GCGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATC 115403 ||| | ||||| | || || ||||| |||||||| || | || |||| Sbjct 698 CCGAAAATGTTGAGAATGTCAAGGCCAAAATACAGGATAAAGAGGGGATTCCACCAGATC 757 Query 115404 AGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATA 115463 |||| ||||| || | ||| || || || | || |||| | ||| | ||||||| | Sbjct 758 AGCAGAGACTGATCTTTGCTGGTAAGCAGCTTGAGGATGGAAGAACACTTTCCGATTACA 817 Query 115464 ACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGGAAA 115515 | || || ||||||||||| || ||| | || |||| | || ||||| || Sbjct 818 ATATACAGAAAGAGTCTACAATCCATCTTGTTCTGAGGCTTCGTGGAGGTAA 869 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424623202221520