Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eutreta_20diana_20[genbank_20GCA_5F001015115.1_202015-05-29] 139,046 sequences; 233,053,157 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq31628 84.2 3e-11 >seq31628 Length=8758 Score = 84.2 bits (92), Expect = 3e-11 Identities = 121/171 (71%), Gaps = 0/171 (0%) Strand=Plus/Plus Query 171907 ATCTTTGCCACCCATGAGACGCGTCCCAAATTGACCACACGGTTCAAGGAGATTGATATT 171966 |||||| ||||| | ||| || || |||||||||| ||||| | | ||| ||||| Sbjct 5491 ATCTTTTCCACCTTGTAAACGTGTACCGAATTGACCACGTGGTTCTAATAAATTTATATT 5550 Query 171967 GTTTGAACCCATGTAGTCATTGGCCAACTTGACAATCGTATCCGCGAGGGAGACTTCACC 172026 ||||||||| | |||| | ||||| || ||||| ||| | || || | |||||| Sbjct 5551 GTTTGAACCGACATAGTTTTGTGCCAAATTAACAATGGTAGCTTGTAGTGAAATTTCACC 5610 Query 172027 GTGATGGTAGGCCGACTTGTCCGCGACATACGCCGCCAACTGTGCCACCTT 172077 ||||| ||||| ||| | || || || | | | || |||||||| || Sbjct 5611 ATGATGATAGGCAGACATTTCAGCCACTGAACCGGATAATTGTGCCACTTT 5661 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596315354641680