Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eutreta_20diana_20[genbank_20GCA_5F001015115.1_202015-05-29] 139,046 sequences; 233,053,157 total letters Query= NC_010583.1 Length=111382 Score E Sequences producing significant alignments: (Bits) Value seq14905 98.7 7e-16 >seq14905 Length=119551 Score = 98.7 bits (108), Expect = 7e-16 Identities = 128/177 (72%), Gaps = 0/177 (0%) Strand=Plus/Minus Query 29168 CTGAGTAAATGTACGACTAATAACGTCGTTCTGTTGTTCACGCGTCAGTGCATTAAATCG 29227 |||||| || |||||| | || ||||| | ||| ||||| |||||| | ||||| || Sbjct 42450 CTGAGTGAAAGTACGAGTGATCACGTCCTGCTGCTGTTCCGGCGTCAACGAGTTAAAACG 42391 Query 29228 AACAGCATAGCCAGAGACACGAATGGTCAACTGAGGGTATTTTTCAGGATGTTTCTGTGC 29287 || || || || |||||||| || ||||||||||| || || ||||||||||| || Sbjct 42390 CACGGCGTACCCCGAGACACGGATAGTCAACTGAGGATACTTCTCAGGATGTTTTATCGC 42331 Query 29288 ATCCAAAAGCTGATCACGACTTAACACATTGACATTTAGGTGCTGACCTCCCTCGAC 29344 ||| ||| ||||||| | || || || || || ||||| || || || || Sbjct 42330 ATCTTCGAGCGTCTCACGACGCATGACGTTAACGTTAAGATGCTGCCCCCCTTCTAC 42274 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 355693809847658