Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eutreta_20diana_20[genbank_20GCA_5F001015115.1_202015-05-29] 139,046 sequences; 233,053,157 total letters Query= NC_011273.1 Length=164602 Score E Sequences producing significant alignments: (Bits) Value seq14905 347 1e-90 >seq14905 Length=119551 Score = 347 bits (384), Expect = 1e-90 Identities = 670/989 (68%), Gaps = 61/989 (6%) Strand=Plus/Minus Query 155935 GCCATCAACTGGAACCGCGTGATC---GACGAGAAGGACGCGGAGGTGTGGAACCGGCTG 155991 ||||| ||||||||| |||| ||||| || || |||||||||||||| ||| Sbjct 7442 GCCATTAACTGGAACAA---GATCCAGGACGACAAAGATCTCGAGGTGTGGAACCGTCTG 7386 Query 155992 ACCAACAACTTCTGGCTGCCGGAGAAGATCCCGGTGTCCAATGACGTCCAGTCGTGGCAC 156051 ||| ||| |||||||||||||| ||| |||| | ||||| ||| | | || ||| Sbjct 7385 ACCTCCAATTTCTGGCTGCCGGAAAAGGTCCCATTATCCAACGACATTCCTTCCTGGGCG 7326 Query 156052 CAGCTGACCGAGGAAGAGCGCCTGATCACCATGCGGGTGTTCACCGGCCTGACGATGCTG 156111 ||||| || ||||| | | | || || || |||||||||||||||||| |||| Sbjct 7325 ACGCTGAGCGCCAAAGAGAAGCAGCTGACAATTCGCGTGTTCACCGGCCTGACGCTGCTC 7266 Query 156112 GACACCATCCAGGGCACCGTCGGCGCGGTCTCGCTCATCCCGGACGCCATCACCCCGCAC 156171 || || | ||| || ||||||||| | |||| || |||||| |||||||||| Sbjct 7265 GATACGGTGCAGAACATTGTCGGCGCGCCCACGCTGATGAAAGACGCCGTCACCCCGCAT 7206 Query 156172 GAGGAGGCGGTGTACACCAACATCGCGTTCATGGAGAGCGTGCACGCACGCAGCTAC--- 156228 ||||||||||| ||| | || ||| ||||||||| |||||||||||| |||| Sbjct 7205 GAGGAGGCGGTTTACTCGAATATCTGCTTCATGGAGGCGGTGCACGCACGCTCCTACAGT 7146 Query 156229 TCGAACATCTTCTCGACGCTGTGCTCCACCAAGGAGATCGACGCCGCGTTCCGCTGGTCG 156288 |||| | ||||||||||||||| || ||| | |||| ||| | |||||| Sbjct 7145 TCGA---TTTTCTCGACGCTGTGCATGACTTCGGACGTTGACGACGCTTATCGCTGGAGT 7089 Query 156289 GAGGAGAACGCCAACCTGCAGAAGAAGGCTGAGATCGTGCTCAGCTACTACAACGGTGAC 156348 ||||| |||| ||||| || ||||| | ||| | ||| ||||||||||| || Sbjct 7088 GAGGAAAACGTTGCGCTGCAAAACAAGGCCGCGATTATCCTCTCTTACTACAACGGCGAA 7029 Query 156349 GACCCGCTCAAGCGCAAGGTCGCCTCCACGCTGCTGGAGGGCTTCCTGTTCTACAGCGGC 156408 || ||| | | | || |||||| | | | |||||| ||||||||||| ||| Sbjct 7028 GATCCGTTGATGAAGAAAGTCGCCAGCGTGTTCCTGGAGTCATTCCTGTTCTATTCGGGC 6969 Query 156409 TTCTACCTGCCGATGTTCTGGTCGTCGCGAGGCAAGCTCACCAACACCGCCGACATGATC 156468 ||||| ||||| |||| ||||||| || | |||||| |||||||||||||| |||| Sbjct 6968 TTCTATCTGCCAATGTACTGGTCGAGCCGCGCCAAGCTGACCAACACCGCCGATCTGATT 6909 Query 156469 CGGCTCATCATCCGGGACGAGGCCGTGCACGGCTACTACATCGGCTACAAGTTCCAGAAG 156528 || || ||||| || ||||| || |||||||| |||||||| |||||||| ||||| | Sbjct 6908 CGTCTGATCATTCGTGACGAAGCGGTGCACGGTTACTACATTGGCTACAAATTCCAACAN 6849 Query 156529 ------------------------------------GGCCTGGAGA-AGGAGACCAAGGC 156551 ||| | || | |||| | ||| Sbjct 6848 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAACAGGCGTTGAAACTTGAGAGCGAGGA 6789 Query 156552 CCGCCA---GCAGGAACTCAAGGACTACACCTATGAGCTGCTGTTCGAGCTGTTCGACAA 156608 || || ||||| | ||||| | | | ||| ||| | || |||| ||||| Sbjct 6788 GCGTCAAAGGCAGG---TTAAGGATCAGGCGTTTGACCTGATTCAGGACCTGTATGACAA 6732 Query 156609 CGAGCAGGAGTACACCCAGGACCTCTACGACGCCACCGGCCAGACCGAGGACGTGAAGAA 156668 ||| || ||| | || || || |||| || || ||||||||| ||||| Sbjct 6731 CGAAATTCGCTATACCGAAGAGCTGTATGACGGTGTGGGTTGGAGCGAGGACGTTAAGAA 6672 Query 156669 GTTCCTGCGGTACAACGGCAACAAGGCCCTGCAGAACCTGGGCTACGACGCGCTGTT--C 156726 ||||||| ||||||| || || || ||| |||| |||| ||||| |||||||| | Sbjct 6671 ATTCCTGCATTACAACGCTAATAAAGCGCTGATGAACTTGGGTTACGAGGCGCTGTTCCC 6612 Query 156727 AGCCGCAGCGACTGC-GACGTCAACCCGGCCATCCTGAGCGCGCTGTCGCCCGGTGGAGA 156785 ||| |||| | || || || |||||||| || ||| || | ||||| | || Sbjct 6611 AGC--CAGC-ATGGCGGAAGTTAACCCGGCAATTCTGTCGGCATTATCGCCAAACGCCGA 6555 Query 156786 CGAGAACCACGACTTCTTCTCGGGGTCGGGCAGCACGTACGTCATGGCCAAGGGTGTGGT 156845 || ||||||||||||||||| || || ||| | ||||| || | || | || Sbjct 6554 TGAAAACCACGACTTCTTCTCAGGTTCCGGCTCTTCTTACGTTATTGGTAAAGCGGTCAA 6495 Query 156846 CACCGAAGACGACGACTGGGACTTCTGAT 156874 ||||||||||| |||||||| |||| || Sbjct 6494 TACCGAAGACGAGGACTGGGATTTCTAAT 6466 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 525683132485920