Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eutreta_20diana_20[genbank_20GCA_5F001015115.1_202015-05-29] 139,046 sequences; 233,053,157 total letters Query= NC_011423.1 Length=111724 Score E Sequences producing significant alignments: (Bits) Value seq88566 134 1e-26 seq123102 107 1e-18 seq119770 105 5e-18 seq21876 96.9 2e-15 >seq88566 Length=1870 Score = 134 bits (148), Expect = 1e-26 Identities = 161/219 (74%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 14965 AAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCT 15024 || |||||||| | ||||| || ||||| ||||| ||||| | | | ||| ||||| Sbjct 245 AATACTAAATGCAACGTAGATTCCTTTTGAATGTTATAATCACCCAAAGTTCGTCCGTCT 304 Query 15025 TCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCA 15084 || | ||||||||||| | || ||||| || || || ||||||||||||||| || Sbjct 305 TCCAGCTGTTTGCCAGCAAAAATTAAACGTTGCTGATCTGGTGGAATTCCTTCCTTATCT 364 Query 15085 CAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTT 15144 ||| ||| ||| ||| ||| ||||||||| | ||| || || | || |||||| Sbjct 365 TGAATCTTGGCTTTGACATGTTCAATAGTATCGGAAGGTTCAACCTCAAGTGTGATGGTT 424 Query 15145 TTACCTGTCAGAGTTTTTACAAAAATTTGCATATTTGAA 15183 ||||| || || ||||| || || |||||||| | |||| Sbjct 425 TTACCCGTAAGGGTTTTAACGAATATTTGCATTTCTGAA 463 >seq123102 Length=1410 Score = 107 bits (118), Expect = 1e-18 Identities = 163/230 (71%), Gaps = 4/230 (2%) Strand=Plus/Plus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 ||||| |||| | | ||| || ||||| || || || ||||| |||||||||||| | Sbjct 590 CCACCCCGCAGACGCAGAACCAAGTGAAGTGTTGATTCCTTTTGAATGTTGTAATCG--G 647 Query 15010 AGAATTCTCG--CGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTG 15067 | ||| || | || || | || ||||| ||| | || ||||| |||||||| | Sbjct 648 ATAATGTGCGTCCATCCTCAAGCTGCTTGCCGGCGAAAATTAAACGTTGTTGGTCTGGGG 707 Query 15068 GAATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTA 15127 |||| |||||||| || |||||| ||| || | || || ||||| | ||| | Sbjct 708 GAATGCCTTCCTTATCTTGAATTTTTGCTTTAACGTTCTCGATGGTATCCGAAGGTTCAA 767 Query 15128 CGTCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 | || || || || ||||| || |||| ||||| ||||| ||||||||| Sbjct 768 CTTCCAATGTGATAGTTTTGCCAGTCAATGTTTTAACAAATATTTGCATA 817 Score = 100 bits (110), Expect = 2e-16 Identities = 139/193 (72%), Gaps = 4/193 (2%) Strand=Plus/Plus Query 14964 TAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCG--CG 15021 ||| |||||||| | ||||| || || || || || |||||| || ||| || | Sbjct 832 TAATACTAAATGCAATGTAGATTCCTTCTGAATATTATAATCG--GACAATGTGCGTCCA 889 Query 15022 TCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTG 15081 || ||||| |||||||||||| | |||||||| ||||| || ||| |||||||| || Sbjct 890 TCCTCTAACTGTTTGCCAGCGAAAATCAAACGTTGTTGATCTGGTGGGATTCCTTCTTTA 949 Query 15082 TCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATG 15141 || |||||| ||| ||| |||| || ||||| | || || || || || ||| Sbjct 950 TCTTGAATTTTAGCTTTAACATTTTCAATGGTATCAGAAGGCTCAACCTCCAAAGTGATG 1009 Query 15142 GTTTTACCTGTCA 15154 ||||| || |||| Sbjct 1010 GTTTTTCCCGTCA 1022 >seq119770 Length=1537 Score = 105 bits (116), Expect = 5e-18 Identities = 147/206 (71%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 14974 TGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTGT 15033 ||||| || || |||||||| || ||||| ||| ||| | | | |||||||||||| Sbjct 890 TGAAGTGTTGATTCTTTTTGAATATTGTAGTCGGATAGAGTACGTCCATCTTCTAATTGT 949 Query 15034 TTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTTG 15093 || || ||| | || | ||| ||||| || |||||| ||||| || || ||| || Sbjct 950 TTTCCGGCGAAAATAAGACGTTGTTGATCTGGTGGAATACCTTCTTTATCCTGAATCTTA 1009 Query 15094 CTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGTC 15153 ||| ||| |||| || || || || || |||||||| ||||| || || || Sbjct 1010 GCTTTGACATTTTCAATGGTGTCAGATGGCTCCACCTCTAAGGTGATGGTCTTGCCAGTT 1069 Query 15154 AGAGTTTTTACAAAAATTTGCATATT 15179 || ||||| || ||||||||||| || Sbjct 1070 AGTGTTTTGACGAAAATTTGCATTTT 1095 >seq21876 Length=2391 Score = 96.9 bits (106), Expect = 2e-15 Identities = 116/158 (73%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 15020 CGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCT 15079 |||| || | ||| ||||||||| | || ||||| ||||| || ||||| ||||||| Sbjct 896 CGTCCTCCAGTTGCTTGCCAGCGAAGATTAAACGTTGTTGATCTGGAGGAATACCTTCCT 837 Query 15080 TGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAA 15139 |||| ||| || ||| || | || ||||| ||| || || ||||| || | Sbjct 836 TGTCCTGAATCTTAGCTTTGACGTTCTCAATAGTGTCGGATGGCTCGACTTCTAAAGTGA 777 Query 15140 TGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 | ||||| ||||||| ||||||||| || ||||||||| Sbjct 776 TAGTTTTCCCTGTCAAAGTTTTTACGAAGATTTGCATA 739 Score = 89.7 bits (98), Expect = 4e-13 Identities = 148/212 (70%), Gaps = 4/212 (2%) Strand=Plus/Minus Query 14968 ACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAA--TTCTCGCGTCTT 15025 || |||||||| || || || || || |||||||||||| || || | | | |||| Sbjct 720 ACCAAATGAAGCGTTGATTCCTTCTGAATGTTGTAATCG--GACAAGGTACGGCCATCTT 663 Query 15026 CTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCAC 15085 | ||||| ||||| ||| | || |||||||| || || |||||||| |||||||| Sbjct 662 CCAATTGCTTGCCGGCGAAGATTAAACGCTGCTGATCTGGGGGAATTCCCTCCTTGTCCT 603 Query 15086 AAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTT 15145 || || || || |||| || || || || || || | ||| || || | Sbjct 602 GGATCTTAGCCTTAACGTTTTCGATGGTGTCAGACGGCTCAACTTCCAGGGTGATAGTCT 543 Query 15146 TACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 | || |||| ||||||||| || ||||||||| Sbjct 542 TGCCAGTCAAAGTTTTTACGAAGATTTGCATA 511 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356786355252110