Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eutreta_20diana_20[genbank_20GCA_5F001015115.1_202015-05-29] 139,046 sequences; 233,053,157 total letters Query= NC_011802.1 Length=41941 Score E Sequences producing significant alignments: (Bits) Value seq104767 181 3e-41 >seq104767 Length=4578 Score = 181 bits (200), Expect = 3e-41 Identities = 204/273 (75%), Gaps = 0/273 (0%) Strand=Plus/Minus Query 22815 GACGGACGCTACAACTTAAACGATCTCCATGCAGCAGCAGTTGCAAATGGAGAGGCTACA 22874 || || ||||| ||| | || || || || ||||| || || || || |||||||| Sbjct 4353 GAAGGGCGCTATAACCTGAATGACCTTCACGCAGCTGCCGTAATCAAAGGTGAGGCTACT 4294 Query 22875 GAGCAACAGCGCCCAAGCCAGTTTTTGTGTAGCGCGCAGATAAAACGCTTCATAAAAGCA 22934 ||||| || | || || ||||| || | ||||| ||| | || |||||| | ||||| Sbjct 4293 GAGCAGCAAAGGCCCAGTCAGTTCTTAAGAAGCGCTCAGGTTAAGCGCTTCCTTAAAGCC 4234 Query 22935 CTAGAGGCCAAAGTGCAAAAAAGCACTTTGAAACAAATTCAACCACTTAAAATCATTAAA 22994 || | ||||||||| |||||||||| || ||||||||||||||||||| | |||| | Sbjct 4233 CTGAAATCCAAAGTGCTAAAAAGCACTCTGGAACAAATTCAACCACTTAACGTGATTAGA 4174 Query 22995 GGTGGTACCGAACCTGGTGTGTGGGGCGTTGAACTACTGGCAATCAGATATGCAGCATGG 23054 ||||| | ||||| || ||||| ||||| | || || ||||| |||||||||||| Sbjct 4173 GGTGGCGATAATCCTGGCGTTTGGGGTGTTGAGTTGCTAGCTATCAGGTATGCAGCATGG 4114 Query 23055 ATTAAGCCGGAATTTGAAATCGAGGTTTATGAA 23087 ||||| || | ||||||||| || |||||| Sbjct 4113 ATTAATCCAGTATTTGAAATAAGCGTGTATGAA 4081 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 133868195107556