Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eutreta_20diana_20[genbank_20GCA_5F001015115.1_202015-05-29] 139,046 sequences; 233,053,157 total letters Query= NC_013055.1 Length=39896 Score E Sequences producing significant alignments: (Bits) Value seq48654 140 8e-29 >seq48654 Length=89670 Score = 140 bits (154), Expect = 8e-29 Identities = 197/277 (71%), Gaps = 0/277 (0%) Strand=Plus/Minus Query 8846 TCGCCGAAATATCGCGCGCACTCAAACAAATTGCGAAGGAACTCGACGTTCCGATCATCG 8905 ||||||| || || ||| | |||| | ||||| || || | || ||| | | | Sbjct 51624 TCGCCGAGATTTCACGCTCGCTCAGGGCGTTAGCGAAAGAGCTGCAGGTGCCGGTGGTGG 51565 Query 8906 CGCTGTCGCAGCTTAATCGAGGGCTCGAGAATCGCCCAAACAAGCGGCCCGTCATGTCCG 8965 |||| || ||||| || ||| | || ||| | || | | ||||| || |||| |||| Sbjct 51564 CGCTTTCTCAGCTGAACCGAAGCCTGGAGCAGCGTGCCGATAAGCGCCCGGTCAACTCCG 51505 Query 8966 ATCTGCGCGAGTCGGGTGCGATCGAGCAGGATGCCGACGTGATCCTCTTTATCTACCGCG 9025 | || || || || ||| | ||||||||||| |||||| ||||| | |||||||| |||| Sbjct 51504 ACCTCCGTGAATCTGGTTCCATCGAGCAGGACGCCGACTTGATCATGTTTATCTATCGCG 51445 Query 9026 ATGAGGTCTATAACCCCGACAGCGCAGATCGCGGTACGGCCGAAATCATCATTGCGAAGC 9085 | ||||||||| || | |||||| ||| || | || ||||||| | | || | Sbjct 51444 ACGAGGTCTATCACGACAACAGCGAAGAAAAGGGGATCGCGCAAATCATTCTCGGCAAAC 51385 Query 9086 AGCGAAACGGGCCGATTGGCACCGTACGGCTCGCATT 9122 |||| ||||| ||||| ||||| || || ||| |||| Sbjct 51384 AGCGTAACGGTCCGATAGGCACGGTTCGCCTCACATT 51348 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 127335000372216