Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eutreta_20diana_20[genbank_20GCA_5F001015115.1_202015-05-29] 139,046 sequences; 233,053,157 total letters Query= NC_013693.1 Length=158006 Score E Sequences producing significant alignments: (Bits) Value seq2788 156 4e-33 >seq2788 Length=136445 Score = 156 bits (172), Expect = 4e-33 Identities = 293/428 (68%), Gaps = 2/428 (0%) Strand=Plus/Plus Query 53640 AACCAGGCGCTCAAACATCACGCGGTTGATCTGAATACCGTAGTCGATACGGCGTTCGCG 53699 |||||| |||| | |||||| ||||||||| | |||||||| || | || |||| Sbjct 19249 AACCAGACGCTGATACATCAGTTTGTTGATCTGCACGCCGTAGTCCATGTGACGAACGCG 19308 Query 53700 GTTTTCTTCAGTGCCACGGTTATTCTTCAGTACAACGACGTCATCGAACTGGTAA-TGCC 53758 ||| ||||| |||||||| || ||||| || | | | || |||| | |||| Sbjct 19309 GTTGCCTTCAACACCACGGTTGTTTTTCAGAACCAGCAGGCTTTC-AACTTCCAGGTGCC 19367 Query 53759 ACAGAGGGATGTACGCTGTCGCCGCACCACCACGAATGCCGCCCTGGGAGCAAGACTTGA 53818 ||| ||| | || ||||| ||||| || || | ||||||||| ||||| || || | Sbjct 19368 ACATCGGGTAGAACAGGGTCGCAGCACCGCCGCGCACGCCGCCCTGAGAGCAGGATTTAA 19427 Query 53819 GCGCCCCAGTGAGATACTTGATGAATGGGATCAGGCCTGTGTGAACCATCTCTCCGCCGC 53878 |||| || | ||| ||| ||||| ||| || || | || ||||||| Sbjct 19428 CCGCCGTCTGGAAGTGCTTATAGAACGGGATACAGCCGGTATGGAATGCTTCACCGCCGC 19487 Query 53879 GAATAGGACTGCCAATCCCACGGATAGCCCCGACGTCAAAGCCGATACCCGCACGTTTGG 53938 |||| || || || | | ||||||| || ||| | ||||||||| || || | | Sbjct 19488 GAATCGGGCTACCCAGCGCACGGATGCGGCCAGCGTTGATGCCGATACCTGCGCGCTGTG 19547 Query 53939 ACACATAGTCAACGATGGTCTTGGCCGTTGCGTTGATAGAGTCCAGGGTGTCACCAGTTT 53998 | || || | ||||||| ||| || |||||||| ||||||||| |||| || | Sbjct 19548 AAACGTATTTCACGATGGCGCTGGAGGTCGCGTTGATGGAGTCCAGGCTGTCGCCGCACT 19607 Query 53999 TGATCAGGACACAGGAACTGAACTGACGGGTAGGAGTACGAACACCTGCCATAATCGGGG 54058 |||||| || || || |||||||| || || || || || || || | |||||| || | Sbjct 19608 CGATCAGTACGCAAGAGCTGAACTGGCGAGTCGGGGTGCGCACGCCGGACATAATTGGCG 19667 Query 54059 TGGGAAGA 54066 | || ||| Sbjct 19668 TAGGCAGA 19675 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 504612618382560