Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eutreta_20diana_20[genbank_20GCA_5F001015115.1_202015-05-29] 139,046 sequences; 233,053,157 total letters Query= NC_014661.1 Length=164093 Score E Sequences producing significant alignments: (Bits) Value seq2788 185 9e-42 >seq2788 Length=136445 Score = 185 bits (204), Expect = 9e-42 Identities = 306/438 (70%), Gaps = 8/438 (2%) Strand=Plus/Plus Query 141456 TTGATTTGAAGGCCATAATCCATGTGACGAATACGGTTTTCTTCAACACCTTTGTTGTTC 141515 ||||| || | ||| || ||||||||||||| ||||| |||||||||| |||||| Sbjct 19274 TTGATCTGCACGCCGTAGTCCATGTGACGAACGCGGTTGCCTTCAACACCACGGTTGTTT 19333 Query 141516 TTCAACACAATCAAGTTTTCCACTTCAAGGTGCCACATAGGGAAGAACATTGTTGCCGAA 141575 |||| || | || | |||| ||||| ||||||||||| ||| |||||| || || | | Sbjct 19334 TTCAGAACCAGCAGGCTTTCAACTTCCAGGTGCCACATCGGGTAGAACAGGGTCGCAGCA 19393 Query 141576 CCTTTACGAATACCACCTTGAGAACAGCAATGAACCGCTGAGTTAAAGTGCTTCCAGAAA 141635 || || | || || ||||| ||| | | |||||| | | |||||||| |||| Sbjct 19394 CCGCCGCGCACGCCGCCCTGAGAGCAGGATTTAACCGCCGTCTGGAAGTGCTTATAGAAC 19453 Query 141636 GGTACTAC-GCCAGTGTGTTTGACTTCGCCTGGGCCAATTTTCGAACCTTCAGCTCGAAT 141694 || | ||| ||| || || |||| || || ||| ||| || || || Sbjct 19454 GGGA-TACAGCCGGTATGGAATGCTTCACCGCCGCGAATCGGGCTACCCAGCGCACGGAT 19512 Query 141695 CATGCCTGCGTTAATCCCGATACCTGCTCGCTTAGAAACATACTTAACAATAGC---AGA 141751 ||| ||||| || ||||||||||| |||| ||||| || || || || || || Sbjct 19513 GCGGCCAGCGTTGATGCCGATACCTGCGCGCTGTGAAACGTATTTCACGATGGCGCTGGA 19572 Query 141752 GTTTGCATCATTGATTGAGTCAAGGCTGTCACCAGATTCAATAACTACACATGAACTGAA 141811 | | | | ||||| ||||| |||||||| || | || || | ||| || || ||||| Sbjct 19573 GGTCG---CGTTGATGGAGTCCAGGCTGTCGCCGCACTCGATCAGTACGCAAGAGCTGAA 19629 Query 141812 TTGACGAGTTGGGGTACGAACACCAGCCATAATTGGAGTAGGCAACGAGATTTTACGAGT 141871 || ||||| ||||| || || || | ||||||||| ||||||| || || || || Sbjct 19630 CTGGCGAGTCGGGGTGCGCACGCCGGACATAATTGGCGTAGGCAGAGAAATCTTGAAGGT 19689 Query 141872 TGAAACAGCTTCATAAAA 141889 |||||| || ||||| || Sbjct 19690 TGAAACCGCATCATAGAA 19707 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 524057163462480