Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eutreta_20diana_20[genbank_20GCA_5F001015115.1_202015-05-29] 139,046 sequences; 233,053,157 total letters Query= NC_014662.1 Length=165540 Score E Sequences producing significant alignments: (Bits) Value seq2788 192 6e-44 seq14905 109 6e-19 >seq2788 Length=136445 Score = 192 bits (212), Expect = 6e-44 Identities = 338/490 (69%), Gaps = 8/490 (2%) Strand=Plus/Plus Query 137852 GAACAGAGTGATGTAGTCGTCTTTAATCAGACGTTCAAACATCAGGTCGTTGATTTGAAC 137911 |||||||||||||| | || |||||| |||||| | | ||||||| | |||||| || || Sbjct 19225 GAACAGAGTGATGTCGCCGCCTTTAACCAGACGCTGATACATCAGTTTGTTGATCTGCAC 19284 Query 137912 ACCATAATCCAAGTGACGAATTCGGTTTTCATCTACGCCTTTGTTGTTCTTAAGTACGAG 137971 || || |||| |||||||| ||||| | || || || |||||| || || || || Sbjct 19285 GCCGTAGTCCATGTGACGAACGCGGTTGCCTTCAACACCACGGTTGTTTTTCAGAACCAG 19344 Query 137972 GAGGTTCTCAACTTCAAGGTGCCAGATTGGATAGTACAATGTCGCCGCGCCACCACGGAC 138031 ||| | |||||||| |||||||| || || ||| ||| ||||| || || || || || Sbjct 19345 CAGGCTTTCAACTTCCAGGTGCCACATCGGGTAGAACAGGGTCGCAGCACCGCCGCGCAC 19404 Query 138032 TCCGCCTTGGGAACAAGACTTAACTGCTGTTTGGATGTGTTTCCAGAAAGGAATAACTCC 138091 ||||| || || || || ||||| || || |||| ||| || |||| || ||| || Sbjct 19405 GCCGCCCTGAGAGCAGGATTTAACCGCCGTCTGGAAGTGCTTATAGAACGGGATACAGCC 19464 Query 138092 AGTATGCTTGACTTCTCCGAAGCCGATTTTTGAACCTTCTGCACGAATCATACCTGCGTT 138151 ||||| |||| ||| || || ||| ||||| || || ||||| Sbjct 19465 GGTATGGAATGCTTCACCGCCGCGAATCGGGCTACCCAGCGCACGGATGCGGCCAGCGTT 19524 Query 138152 AATGCCGATACCAGCACGTTTAGAGATGTACTCTACAATTGATTCAGCT-GATTT---GT 138207 ||||||||||| || || | || | ||| | || ||| ||| || | || Sbjct 19525 GATGCCGATACCTGCGCGCTGTGAAACGTATTTCAC----GATGGCGCTGGAGGTCGCGT 19580 Query 138208 TAATTGACTTCAGTGAATCACCAGCTTCAATAACAACGCAAGAACTGAATTGACGAGTAG 138267 | || || | ||| || || || || | |||||||| ||||| || ||||| | Sbjct 19581 TGATGGAGTCCAGGCTGTCGCCGCACTCGATCAGTACGCAAGAGCTGAACTGGCGAGTCG 19640 Query 138268 GAGTACGAGCACCTGCCATGATTGGAGTTGGCAGAGAAATTTTCTTAGTTGACACAGCAT 138327 | || || | || | ||| ||||| || ||||||||||| || ||||| || |||| Sbjct 19641 GGGTGCGCACGCCGGACATAATTGGCGTAGGCAGAGAAATCTTGAAGGTTGAAACCGCAT 19700 Query 138328 CATAAAAACG 138337 |||| ||||| Sbjct 19701 CATAGAAACG 19710 >seq14905 Length=119551 Score = 109 bits (120), Expect = 6e-19 Identities = 128/173 (74%), Gaps = 0/173 (0%) Strand=Plus/Minus Query 62002 GTGAAAGTACGTGCAATAACGTCACGCTGCTGTTCTGACGTCAGAGAATTAAATCGGACA 62061 ||||||||||| | || ||||| |||||||||| | ||||| || ||||| || || Sbjct 42446 GTGAAAGTACGAGTGATCACGTCCTGCTGCTGTTCCGGCGTCAACGAGTTAAAACGCACG 42387 Query 62062 GCATAACCAGAAACACGAATAGTCAGCTGAGGATATTTTTCTGGATGTTGAACTGCATCT 62121 || || || || ||||| ||||||| ||||||||| || || ||||||| | |||||| Sbjct 42386 GCGTACCCCGAGACACGGATAGTCAACTGAGGATACTTCTCAGGATGTTTTATCGCATCT 42327 Query 62122 TCTAAAGTTTCTTTAGTCAGAACATTCACGTTCAGATGTTGGCCACCTTCAAC 62174 || | || || | || || || ||||| ||||| || || ||||| || Sbjct 42326 TCGAGCGTCTCACGACGCATGACGTTAACGTTAAGATGCTGCCCCCCTTCTAC 42274 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 528679515480000