Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eutreta_20diana_20[genbank_20GCA_5F001015115.1_202015-05-29] 139,046 sequences; 233,053,157 total letters Query= NC_014792.1 Length=169285 Score E Sequences producing significant alignments: (Bits) Value seq2788 159 4e-34 >seq2788 Length=136445 Score = 159 bits (176), Expect = 4e-34 Identities = 337/497 (68%), Gaps = 12/497 (2%) Strand=Plus/Plus Query 141303 GGACTAAACAGAGTGATGTAATCATTCTTAGCCAGTCGTTCCATCATCAGGTTATTCAAC 141362 || || ||||||||||||| | ||| |||| || | |||||| || || | | Sbjct 19220 GGGCTGAACAGAGTGATGTCGCCGCCTTTAACCAGACGCTGATACATCAGTTTGTTGATC 19279 Query 141363 TGAACACCATAGTCCATATGTCTGATGCGGTTTTCTTCAACGCCCTTGTTGTTCTTCAGA 141422 || || || |||||||| || | | |||||| ||||||| || |||||| |||||| Sbjct 19280 TGCACGCCGTAGTCCATGTGACGAACGCGGTTGCCTTCAACACCACGGTTGTTTTTCAGA 19339 Query 141423 ACGAGTAAATTTTCAACTTCCAAATGCCATAAAGGATAATAAGCAGTAGCAGCGCCGCCA 141482 || || | |||||||||||| ||||| | || || | || ||||| ||||| Sbjct 19340 ACCAGCAGGCTTTCAACTTCCAGGTGCCACATCGGGTAGAACAGGGTCGCAGCACCGCCG 19399 Query 141483 CGGATTCCACCTTGTGAACAGGATTTAACAGCCGTTTGGAAATGTTTCCAGAACGGAATA 141542 || | || || || || ||||||||||| ||||| ||||| || || ||||||| ||| Sbjct 19400 CGCACGCCGCCCTGAGAGCAGGATTTAACCGCCGTCTGGAAGTGCTTATAGAACGGGATA 19459 Query 141543 ACACCAGTATGCTTGACTTCACCCATACCGATTTTCG---AACCTTCAGCACGAATCATG 141599 || ||||| ||||||| ||| ||| ||| ||||| || | Sbjct 19460 CAGCCGGTATGGAATGCTTCACC---GCCGCGAATCGGGCTACCCAGCGCACGGATGCGG 19516 Query 141600 CCAACGTTGATACCGATACCCGCCCGCTTACTGATA--TATTCGATGATTGAATTGGCGG 141657 ||| ||||||| |||||||| || |||| ||| | |||| | ||| | ||| || Sbjct 19517 CCAGCGTTGATGCCGATACCTGCGCGCT--GTGAAACGTATTTCACGATGGCGCTGGAGG 19574 Query 141658 TCTTATTGATTGACTTCAGGGAGTCAGCAGC-TTCGATAACCACACAGGAACTGAACTGC 141716 || ||||| || | |||| ||| || || ||||| | || || || |||||||| Sbjct 19575 TCGCGTTGATGGAGTCCAGGCTGTC-GCCGCACTCGATCAGTACGCAAGAGCTGAACTGG 19633 Query 141717 CGGGTAGGTGTTCTGGCGCCCGCCATGATAGGTGTGGGCAACGAAACCTGTCTTGTGGAT 141776 || || || || | |||| | ||| || || || |||| |||| || || || Sbjct 19634 CGAGTCGGGGTGCGCACGCCGGACATAATTGGCGTAGGCAGAGAAATCTTGAAGGTTGAA 19693 Query 141777 ACTGCATCATAAAAACG 141793 || |||||||| ||||| Sbjct 19694 ACCGCATCATAGAAACG 19710 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 540642686389200