Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Eutreta_20diana_20[genbank_20GCA_5F001015115.1_202015-05-29]
139,046 sequences; 233,053,157 total letters
Query= NC_016570.1
Length=157304
Score E
Sequences producing significant alignments: (Bits) Value
seq2788 98.7 1e-15
>seq2788
Length=136445
Score = 98.7 bits (108), Expect = 1e-15
Identities = 286/434 (66%), Gaps = 10/434 (2%)
Strand=Plus/Plus
Query 52470 TTCACCAGGCGCTCGAACATGACGCGGTTAATCTGAATCCCATAGTCGATACGGCGTTCA 52529
|| ||||| |||| |||| | ||| ||||| | || ||||| || | || |
Sbjct 19247 TTAACCAGACGCTGATACATCAGTTTGTTGATCTGCACGCCGTAGTCCATGTGACGAACG 19306
Query 52530 CGGTTCTCTTCCAATCCACGGTTGTTTTTGAGAACAACGACATCATCAAATTGATAATGC 52589
||||| |||| | |||||||||||||| ||||| | | |||| || |||
Sbjct 19307 CGGTTGCCTTCAACACCACGGTTGTTTTTCAGAACCAGCAGGCTTTCAACTTCCAGGTGC 19366
Query 52590 CAGATGGGAACATAGCATGTT-GCCGATCCACCACGGATACCGCCTTGAGAGCAAGACTT 52648
|| || || | | || | | || | || || || | ||||| |||||||| || ||
Sbjct 19367 CACATCGGGT-AGAACAGGGTCGCAGCACCGCCGCGCACGCCGCCCTGAGAGCAGGATTT 19425
Query 52649 CAGGGCACCAGTC---AAATACTTGATGAATGGAAC-CAGACCTGTATGGACCATTTCCC 52704
| || ||| || | ||| ||| || | ||| || ||||||| ||| |
Sbjct 19426 AACCGCC---GTCTGGAAGTGCTTATAGAACGGGATACAG-CCGGTATGGAATGCTTCAC 19481
Query 52705 CTTTACGGATAGGGCTACCGATGCCACGAATTGCCCCAACATCGAATCCGATGCCAGCAC 52764
| || || |||||||| | |||| || ||| | | || ||||| || || |
Sbjct 19482 CGCCGCGAATCGGGCTACCCAGCGCACGGATGCGGCCAGCGTTGATGCCGATACCTGCGC 19541
Query 52765 GTTTGGAAACATAATCCACGATGCTTTTCGCAGTGGCATTAATTGAGTCCAATGTATCAC 52824
| | ||||| || | ||||||| | | || || || || ||||||| | || |
Sbjct 19542 GCTGTGAAACGTATTTCACGATGGCGCTGGAGGTCGCGTTGATGGAGTCCAGGCTGTCGC 19601
Query 52825 CAGTTTTGATCAATACACAAGAGCTGAACTGTCGGGTCGGGGTGCGGACGCCGGACATAA 52884
| | ||||| ||| |||||||||||||| || ||||||||||| |||||||||||||
Sbjct 19602 CGCACTCGATCAGTACGCAAGAGCTGAACTGGCGAGTCGGGGTGCGCACGCCGGACATAA 19661
Query 52885 TAGGTGTTGGAAGA 52898
| || || || |||
Sbjct 19662 TTGGCGTAGGCAGA 19675
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 502370122794240
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |