Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eutreta_20diana_20[genbank_20GCA_5F001015115.1_202015-05-29] 139,046 sequences; 233,053,157 total letters Query= NC_017981.1 Length=49981 Score E Sequences producing significant alignments: (Bits) Value seq48654 235 2e-57 >seq48654 Length=89670 Score = 235 bits (260), Expect = 2e-57 Identities = 247/324 (76%), Gaps = 3/324 (1%) Strand=Plus/Plus Query 25950 CATCTGCATGGTTCCGCCAACGTTGACCACAATTTCAGTGGTGTAGCGCTCAACGCCGTC 26009 |||||||||||| || |||||||| ||||| ||||| |||||||| ||||| ||| | Sbjct 37299 CATCTGCATGGTGCCACCAACGTTTACCACGATTTCGGTGGTGTATTTTTCAACACCGGC 37358 Query 26010 CTTTTC---CCACTTGCGGGTTTTCAGTTGCCCCTCAATGTAAACCTGTGAACCTTTCTT 26066 || || |||||| ||||||| |||| || ||||| |||||||| || ||||| Sbjct 37359 CTGATCGGTCCACTTACGGGTTTGCAGTGCGCCTTCAATATAAACCTGAGAGCCTTTACG 37418 Query 26067 CAGGTACTCGCCCGCGATCTCCGCTACCTTGCCAAACAGCACGACGCGATGCCATTCTGT 26126 |||||| |||||||||| || || | ||||| |||| ||| ||||| |||||||| || Sbjct 37419 CAGGTATTCGCCCGCGACTTCTGCGAGTTTGCCGAACAACACAACGCGGTGCCATTCAGT 37478 Query 26127 CACTTCTTTCTTTTCGCCGGTCTGCTTATCGTTCCAGCTTTCTGAGGTCGCTACGGTAAT 26186 ||||||| ||||||||| ||| ||| ||||||||| || || || | ||| || Sbjct 37479 TTTCTCTTTCTGCTCGCCGGTCGCCTTGTCGCGCCAGCTTTCAGAAGTTGCCAGGGTGAT 37538 Query 26187 GTTGGCGACTGCGCCGCCATTAGGCATGTAACGGATCTCTGGATCGTTCCCCAGGTTACC 26246 ||||| || || ||||| |||||||| || |||| || ||||| | ||||| || || Sbjct 37539 ATTGGCAACAGCACCGCCGTTAGGCATATAGCGGACTTCGGGATCCTGACCCAGATTCCC 37598 Query 26247 GACAAGGATTACTTTATTTACGCC 26270 || || || ||||| |||||||| Sbjct 37599 AACCAGAATCACTTTGTTTACGCC 37622 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 159553713773636