Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eutreta_20diana_20[genbank_20GCA_5F001015115.1_202015-05-29] 139,046 sequences; 233,053,157 total letters Query= NC_018452.1 Length=61847 Score E Sequences producing significant alignments: (Bits) Value seq48654 93.3 2e-14 >seq48654 Length=89670 Score = 93.3 bits (102), Expect = 2e-14 Identities = 199/295 (67%), Gaps = 2/295 (1%) Strand=Plus/Minus Query 9972 CGTCAACAAAGTCATCCTCGTCGGCAATCTCGGCGCCGACCCGGAAACCCGCTACCTCCC 10031 ||| |||||||| || || || || ||||| || || || ||| |||||| | || Sbjct 37620 CGTAAACAAAGTGATTCTGGTTGGGAATCTGGGTCAGGATCCCGAAGTCCGCTATATGCC 37561 Query 10032 GAGCGGCGACGCAATCTCCAACATCCGCCTCGCTACGACCGATCGCTACAAGGACAAGGC 10091 | ||||| || | |||| ||| ||| || || | || ||| |||||||| Sbjct 37560 TAACGGCGGTGCTGTTGCCAATATCACCCTGGCAACTTCTGAAAGCTGGCGCGACAAGGC 37501 Query 10092 GAGCGGCGAGATGAAGGAATCGACCGAATGGCACCGCGTCAGCTTCTTCGGCCGCCTCGC 10151 || ||||||| ||| || || |||||||||||||| || |||||| ||||| Sbjct 37500 GACCGGCGAGCAGAAAGAGAAAACTGAATGGCACCGCGTTGTGTTGTTCGGCAAACTCGC 37441 Query 10152 CGAGATCGTCGACGAGTACCTGCGCAAGGGCGCGCCGGTCTACATCGAGGGCCGCA-TCC 10210 || ||| | ||| |||||||| || ||| | | ||| || || || || |||| | | Sbjct 37440 AGAAGTCGCGGGCGAATACCTGCGTAAAGGCTCTCAGGTTTATATTGAAGG-CGCACTGC 37382 Query 10211 GCACGCGGAAGTGGCAGGATAACGCCGGCCAGGATCGCTACACGACCGAGATCGT 10265 || || |||||| ||| | ||||| || ||||| ||||| ||||| Sbjct 37381 AAACCCGTAAGTGGACCGATCAGGCCGGTGTTGAAAAATACACCACCGAAATCGT 37327 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 197462216819868