Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eutreta_20diana_20[genbank_20GCA_5F001015115.1_202015-05-29] 139,046 sequences; 233,053,157 total letters Query= NC_018454.1 Length=39974 Score E Sequences producing significant alignments: (Bits) Value seq17393 131 4e-26 >seq17393 Length=1625 Score = 131 bits (144), Expect = 4e-26 Identities = 316/467 (68%), Gaps = 26/467 (6%) Strand=Plus/Plus Query 32599 CAGGACGCCGACAACCGCGCTTCTTATGCGTTTGGTGG---CGTGACTAACACTGCCTCC 32655 |||||| | ||||| | || ||||| || ||||| ||| |||||||| | Sbjct 782 CAGGACCCAGACAATAAGCCCTCCTATGCTTTCGGTGGGCCCGT---TAACACTGTTGCG 838 Query 32656 CAGGGCTACCCGGTGCCGCTTCTTTACGGCAAGCGCCGGATAGGTGGGGCGATTATCTCC 32715 || ||| | |||||||| ||||||| ||| ||||| || || ||||||||||||||| Sbjct 839 CAAGGCAATCCGGTGCCAATTCTTTATGGCCGCCGCCGCATTGGGGGGGCGATTATCTCC 898 Query 32716 GCAGGCATTTACGCCGAGGATCAGCAGTAA-GTTAAACCA-GATAACAGGCCGCCTCCGG 32773 || || |||||||| || || ||||| ||| |||||| | ||| | || || ||| Sbjct 899 GCCGGAATTTACGCTGAAGACCAGCAATAACTTTAAACGATTCTAAAAAACCCGCTACGG 958 Query 32774 GCGGCTTTTTTGTG-GGCGCGATATGACAGAAAAAGCGATTC--ATGGCGCAAAAGGCGG 32830 || |||||| || | || ||| || || | || | | |||||| || || Sbjct 959 CGGGATTTTTTTTGCCTGGAGAAATG--TGATGTCGCCAATCAAAGGCCGCAAAGGGGGG 1016 Query 32831 TGGCG-GCAGCCAGCACAC--GCCGAAAGAGCAGGACGACAACCTGCTTTCCGTCGCCAA 32887 | | | |||||||||| | ||| | | || ||||| || | | | Sbjct 1017 AGCAGTTCTGCCAGCACACCGGTTGAATCACC----TGATTCCCTGCAGTCTACCTCTTA 1072 Query 32888 AGCCAAAGTGCTGGTGGCGCTGGGCGAAGGGGAGTTCGACGGCCAGCTTGATGG---CAA 32944 || ||| ||||| |||| || ||||||||||| || | || ||| ||||| ||| Sbjct 1073 CGCAAAAATGCTGCTGGCACTCGGCGAAGGGGAATTTGCTGGAGGGCTGGATGGTACCAA 1132 Query 32945 ATCCATATTCCTGGACGGCACGCCGCTGGTGAACGCCGACGGGAGCGAGAATTTTCCCGG 33004 | || || || |||||||||||| | | | |||| || | |||||||| || || Sbjct 1133 A---ATCTTTCTCGACGGCACGCCGATACTCTCCCCCGATGGCACTGAGAATTTCCCTGG 1189 Query 33005 CGTGAAATGGGAGTTTCGCCCCGGCACACAGGCGCAGGAATACATTC 33051 |||| ||||||||||| |||||||| | ||||||||||||| Sbjct 1190 TGTGACGTGGGAGTTTCGTCCCGGCACGCCTAATCAGGAATACATTC 1236 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 127584188239872