Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eutreta_20diana_20[genbank_20GCA_5F001015115.1_202015-05-29] 139,046 sequences; 233,053,157 total letters Query= NC_019500.1 Length=168066 Score E Sequences producing significant alignments: (Bits) Value seq2788 149 7e-31 >seq2788 Length=136445 Score = 149 bits (164), Expect = 7e-31 Identities = 301/447 (67%), Gaps = 0/447 (0%) Strand=Plus/Minus Query 94816 CGTTTTTATGATGCTGTAAGTACCCGTCAGGTTTCATTACCAACTCCTATTATGGCTGGA 94875 ||||| |||||||| || ||| || |||| | || || || |||||| | || Sbjct 19710 CGTTTCTATGATGCGGTTTCAACCTTCAAGATTTCTCTGCCTACGCCAATTATGTCCGGC 19651 Query 94876 GCACGTACACCAACCCGTCAATTTAGTTCTTGTGTGGTTATTGAAGCAGGCGACTCACTG 94935 | || || || || || || || || ||||| || | || || |||||| ||| Sbjct 19650 GTGCGCACCCCGACTCGCCAGTTCAGCTCTTGCGTACTGATCGAGTGCGGCGACAGCCTG 19591 Query 94936 AAATCTATTAACAAAACTGCTAACTCAATAATTGAATACATTTCTAAACGTGCCGGTATT 94995 | || || ||| || | | | | || | ||||| |||| | || || ||||| Sbjct 19590 GACTCCATCAACGCGACCTCCAGCGCCATCGTGAAATACGTTTCACAGCGCGCAGGTATC 19531 Query 94996 GGTATCAACGTTGGTATGATTCGTGCTGAAGGTTCTCGTATTGGCATGGGCGAAGTCAAG 95055 || ||||||| ||| || ||||| ||| | ||| || || |||| Sbjct 19530 GGCATCAACGCTGGCCGCATCCGTGCGCTGGGTAGCCCGATTCGCGGCGGTGAAGCATTC 19471 Query 95056 CATACCGGTGTTATTCCATTCTGGAAACATTTCCAGACTGCTGTTAAATCATGTTCACAA 95115 |||||||| ||| || |||| || || |||||||| || |||||||| || || || Sbjct 19470 CATACCGGCTGTATCCCGTTCTATAAGCACTTCCAGACGGCGGTTAAATCCTGCTCTCAG 19411 Query 95116 GGTGGAATCCGTGGCGGCGCTGCTACTGCTTATTATCCTATTTGGCATTTGGAAGTTGAA 95175 || || | || ||||| ||||| || | || || || ||||| ||||||||||| Sbjct 19410 GGCGGCGTGCGCGGCGGTGCTGCGACCCTGTTCTACCCGATGTGGCACCTGGAAGTTGAA 19351 Query 95176 AATCTGCTCGTTCTGAAAAACAACAAAGGTGTCGATGAGAACCGTATTCGCCATATGGAC 95235 | ||||| ||||||||||||||| ||||| || | ||||| |||| || |||||| Sbjct 19350 AGCCTGCTGGTTCTGAAAAACAACCGTGGTGTTGAAGGCAACCGCGTTCGTCACATGGAC 19291 Query 95236 TACGGAATCCAGATGAACGACCTTATG 95262 ||||| | ||||| ||| | || ||| Sbjct 19290 TACGGCGTGCAGATCAACAAACTGATG 19264 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 536748666272160