Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eutreta_20diana_20[genbank_20GCA_5F001015115.1_202015-05-29] 139,046 sequences; 233,053,157 total letters Query= NC_019501.1 Length=39646 Score E Sequences producing significant alignments: (Bits) Value seq48654 143 7e-30 >seq48654 Length=89670 Score = 143 bits (158), Expect = 7e-30 Identities = 238/344 (69%), Gaps = 0/344 (0%) Strand=Plus/Plus Query 4174 CCACCAAGCATTTGCATGGTTCCACCAACGCCCACGATGACTTCGGTAGTGAACCTATCC 4233 ||||| ||||| |||||||| ||||||||| || | || |||||| ||| | | || Sbjct 37291 CCACCCAGCATCTGCATGGTGCCACCAACGTTTACCACGATTTCGGTGGTGTATTTTTCA 37350 Query 4234 TGTCCGCTTTGATCCTGCCATTTTCTTGTCCGCAATTTTCCTTCAAGATAAACCTCAGAG 4293 ||| ||||| ||| || | || ||| | ||||||| |||||||| |||| Sbjct 37351 ACACCGGCCTGATCGGTCCACTTACGGGTTTGCAGTGCGCCTTCAATATAAACCTGAGAG 37410 Query 4294 CCTTTTCGCAGATATTCGCTGGCAATTTCTGCCAGTTTCCCGCTCATTACCACGCGGTGC 4353 ||||| ||||| ||||||| || | |||||| ||||| ||| || || ||||||||| Sbjct 37411 CCTTTACGCAGGTATTCGCCCGCGACTTCTGCGAGTTTGCCGAACAACACAACGCGGTGC 37470 Query 4354 CACTCCGTCTGCTCCTTTTGCTCTCCAGTTTGCTTATCACGCCATTGTTCTGACGTAGCA 4413 || || || | ||| || ||||| || || ||| || ||||| ||| || || || Sbjct 37471 CATTCAGTTTTCTCTTTCTGCTCGCCGGTCGCCTTGTCGCGCCAGCTTTCAGAAGTTGCC 37530 Query 4414 ACTGTAAGGTTTGCAAATGCCGTTCCTGATGGTGAATATCTGATTTCTGGATCATGCCCA 4473 | || | || |||| || || || ||| | || ||| ||||| || || Sbjct 37531 AGGGTGATATTGGCAACAGCACCGCCGTTAGGCATATAGCGGACTTCGGGATCCTGACCC 37590 Query 4474 AGGCGACCAATAATGATCACCTTATTTACGCCTCTGCTTGCCAT 4517 || |||| | ||||| || |||||||||||||| ||||| Sbjct 37591 AGATTCCCAACCAGAATCACTTTGTTTACGCCTCTGCTGGCCAT 37634 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 126536321309216