Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eutreta_20diana_20[genbank_20GCA_5F001015115.1_202015-05-29] 139,046 sequences; 233,053,157 total letters Query= NC_019704.1 Length=44375 Score E Sequences producing significant alignments: (Bits) Value seq37156 107 5e-19 seq17393 93.3 1e-14 >seq37156 Length=2737 Score = 107 bits (118), Expect = 5e-19 Identities = 119/159 (75%), Gaps = 0/159 (0%) Strand=Plus/Plus Query 42645 ACGTTCCAGCGCAATGCACGCCGATACCGACGGACCTGACGCAGCCGATGATAGTACCGC 42704 |||| ||||||||||| || |||||||| ||||||| ||||| || |||| || | Sbjct 380 ACGTGCCAGCGCAATGTACACCGATACCAGCGGACCTATTAAAGCCGCTGTTAGTGCCAC 439 Query 42705 TGCCGCCGGCTCAATAACGTACTGCCAGGCTGTGCTCTGGATTAAGCCGCTGCTGGCCGT 42764 | || || || ||||||||| ||||||||||| |||||||| | ||||| ||| || | Sbjct 440 TACCTCCCGCCGAATAACGTATTGCCAGGCTGTTCTCTGGATGGACCCGCTACTGACCCT 499 Query 42765 GATTGAAAAGGGCAATAACAATTTCGCTGGAATTCGTCA 42803 ||||| | ||||| || | || || | ||||| || Sbjct 500 TATTGACCAAGGCAACAATCAGTTGGCGAGCATTCGACA 538 >seq17393 Length=1625 Score = 93.3 bits (102), Expect = 1e-14 Identities = 102/136 (75%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 15089 CCTCATACGCGTTCGGTGGAGTCACCAACACCGCCGCGCAGGGCTATCCGGTACCGCTTC 15148 |||| || || |||||||| | ||||| | ||||| ||| ||||||| || ||| Sbjct 801 CCTCCTATGCTTTCGGTGGGCCCGTTAACACTGTTGCGCAAGGCAATCCGGTGCCAATTC 860 Query 15149 TTTATGGTCGTCGGCAAATCGGCGGTGCGATTATTTCTGCCGGGATTTATGTCGAAGACC 15208 ||||||| || || | || || || |||||||| || ||||| ||||| | ||||||| Sbjct 861 TTTATGGCCGCCGCCGCATTGGGGGGGCGATTATCTCCGCCGGAATTTACGCTGAAGACC 920 Query 15209 AGCAATAAATAAAAAC 15224 |||||||| | |||| Sbjct 921 AGCAATAACTTTAAAC 936 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 141644134464924