Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eutreta_20diana_20[genbank_20GCA_5F001015115.1_202015-05-29] 139,046 sequences; 233,053,157 total letters Query= NC_019723.1 Length=47090 Score E Sequences producing significant alignments: (Bits) Value seq43481 167 7e-37 seq70006 102 2e-17 seq81489 89.7 2e-13 >seq43481 Length=83004 Score = 167 bits (184), Expect = 7e-37 Identities = 263/377 (70%), Gaps = 0/377 (0%) Strand=Plus/Plus Query 35505 TTTGTCTCAATTGCAACGCCTATAATCTTGCAGTTTCCATTGATTGGCACGAGAGGCCAT 35564 || ||||| | || ||||| || || ||| || |||||||| || || | ||||| Sbjct 67775 TTAGTCTCGACGGCGACGCCAATGATGCGGCAATTGCCATTGATCGGAACCATCGGCCAG 67834 Query 35565 GCAGGATTAAGTCCCTTGAGGTATTTATTTCCGCCGTCGATTATCAGCTTCTTGAATGTT 35624 || ||||| | ||||| |||||||| | ||||| || | | ||||||||| || Sbjct 67835 GCGGGATTTAACCCCTTAAGGTATTTCTGGTTACCGTCTATCACTAACTTCTTGAACGTC 67894 Query 35625 GCTTCGTTAGAGTCAGAAAGTTTTGCTATGACCAAGCTGCCGTTGATCGCCTCCCTTCCG 35684 |||||||| | || | ||||| || || || | |||||||| | ||||| | ||| Sbjct 67895 GCTTCGTTGGCATCGGTCAGTTTGGCGATCACTAGTTTGCCGTTGGTGGCCTCTTTGCCG 67954 Query 35685 GTATCGAAAAGAACGAATGTTCCCTCTGGAATGCTTAACCCAACCGGTGCCGTCATTGAA 35744 || || || || || || || || || |||||||| | ||| | || || ||||| || Sbjct 67955 GTGTCAAACAGGACAAAGGTCCCTTCAGGAATGCTGAGCCCCATGGGGGCGGTCATCGAG 68014 Query 35745 TCACCTTCCACTTTAAGCCAGAACGCATTACCTTGAATATGCGCGTCAGACTCAAGCCAA 35804 ||||| || || | ||| || | | || |||||||||||||||||||||||||| Sbjct 68015 TCACCGTCAACCAGTAACCAAAATCCCTCGCCCTGAATATGCGCGTCAGACTCAAGCCAG 68074 Query 35805 ACATCTATGTCTTTAATGGTGTATGGTTCGCATGCTTCACACCACGAGCCAGCCTGGATA 35864 || || ||||| | | | || | || ||||| ||| | || ||||||| Sbjct 68075 TGGTCGATATCTTTTAGGCTATAAGCCTCAATGGCTTCGTTCCAGGCACCGGCCTGGACC 68134 Query 35865 CTGCTTAACACCGGATA 35881 |||||| ||||||||| Sbjct 68135 TTGCTTATCACCGGATA 68151 >seq70006 Length=3190 Score = 102 bits (112), Expect = 2e-17 Identities = 84/101 (83%), Gaps = 1/101 (1%) Strand=Plus/Minus Query 21698 CGGACACACCATCACCGTTAACGCTGCGGGTAACGCGGAAAACACCGTCAAAAACATTGC 21757 ||| |||||||| ||||||||| | | |||||| ||||| || || || |||||||| Sbjct 625 CGGCCACACCATTACCGTTAACTCGTCAGGTAACTCGGAAGTGACAGTTAAGAACATTGC 566 Query 21758 ATTTAACTATATTGTGAGGCTTGCATAATGGCATTCAGAAT 21798 ||||||||| |||||||||||||| ||||| ||||| |||| Sbjct 565 ATTTAACTACATTGTGAGGCTTGCCTAATGTCATTC-GAAT 526 >seq81489 Length=1574 Score = 89.7 bits (98), Expect = 2e-13 Identities = 157/226 (69%), Gaps = 2/226 (1%) Strand=Plus/Minus Query 31403 ACCACCGAGCCGGAACTTCATGAAATCCCGGGAGGTAAACGGGCATTTCAGTTCAAGGCC 31462 |||||| | | |||||||||| ||| | | || | |||| ||||||||||||||| Sbjct 619 ACCACCCAACAGGAACTTCATAAAAACTGCGCTTGTGTAAGGGCTTTTCAGTTCAAGGCC 560 Query 31463 GTTGCCGTCACTGCATAAACCATCGGGAGAGCAGGCGGTACGCATACTTTCGTCGCGATA 31522 | || |||||||| | ||||| || ||||||||| || | ||||| || Sbjct 559 GCGTCCATCACTGCACATGCCATCAGGTGAGCAGGCGCACCGAAGCGAGTCGTCCTTGTA 500 Query 31523 GATGATCGGGGATTCAGTAACATTCACGCCGGAAGTGAATTCAAACAGGGTTC-TGGCGT 31581 || ||||| || | ||| || ||| | | |||||||||||||| |||| || | Sbjct 499 AATTATCGGCACATCCGAAACTTTAACGTCCGTTGTGAATTCAAACAGCGTTCGTGCTGA 440 Query 31582 CGTTCTCGTACTGTTTTCCCCAGGCCAGTGCTTTAGCGTTAACTTC 31627 | | || | || ||| ||||| ||||| | || |||||||| || Sbjct 439 TGCT-TCATGCTCTTTCCCCCATGCCAGGGGCTTGGCGTTAACCTC 395 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 150317789089104