Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eutreta_20diana_20[genbank_20GCA_5F001015115.1_202015-05-29] 139,046 sequences; 233,053,157 total letters Query= NC_019724.1 Length=43741 Score E Sequences producing significant alignments: (Bits) Value seq139038 273 6e-69 >seq139038 Length=11747 Score = 273 bits (302), Expect = 6e-69 Identities = 871/1323 (66%), Gaps = 47/1323 (4%) Strand=Plus/Minus Query 27040 CGACGTTCGGCGACCAGTTCATCCAGTGTGCCGCGAGCCTGGATAATGTAGACGAATACT 27099 || || || ||||| | ||| || || || ||| |||||| || | | | || || ||| Sbjct 10843 CGGCGCTCCGCGACGACTTCGTCGAGCGTACCGGCAGCCTGTATCAAGAACACAAAAACT 10784 Query 27100 GGACGAGGGTGCCCGGCTTGCATCTGGCGAACTGGCCCGATACGCTCCACGATCTGCGCA 27159 || || || || || || || || || |||||||| || || || |||||||||| | Sbjct 10783 GGCCGTGGATGGCCCGCCTGATGTTGTCGCACTGGCCCTATTCGTTCGACGATCTGCGAA 10724 Query 27160 AAGTGCTCGTAGTTCCAGGTGTCTGAGAAGATAGCAAGGTGGTGTCCGCCATCCTGCAAG 27219 ||| || ||||||| || || || | || || ||||||||||| || |||||| Sbjct 10723 TAGTATTCCAAGTTCCACGTATCACTAAAAACGGCCAGATGGTGTCCGCCGTCTTGCAAG 10664 Query 27220 TTAAGGCCGTGACCCGCCGAT-GCCGGGTGCGCAAACATGATGGGGATCTCGCCCCTGTT 27278 ||||||||||| |||| || | |||||||| || || | || ||||||| || ||| Sbjct 10663 TTAAGGCCGTG-CCCGGCGCTGGCCGGGTGAGCCAATAGCATAGGGATCTTCCCTTGGTT 10605 Query 27279 CCACGCTTCCATATCCTTATTTCCTTGCTTTCCCTTACCCATCGCTACGCCGTGCGGGAA 27338 |||| || |||| || | || || || |||| || ||| | | ||||| Sbjct 10604 CCACAGCTCGATATTGCGGGTTGCGGTTTTACCTTTGCCCAGTGCCACGGCCTCGGGGAA 10545 Query 27339 TTTCTTCTTAAGACGTGCCAAGTCATGCTTGTACTGGTACGCGACGAGCAACGGTGCGCC 27398 ||||||| | ||| || |||||| || | || || || | || || || || Sbjct 10544 TTTCTTCAGGATGCGTTCCCGGTCATGGCGATAGTAATAGGCCACTAACAGTGGCGCACC 10485 Query 27399 GTTCAACTCCTCCACGATACTTTCCAGCGCGTCCAGTTTAGCGTCGTGGATTTTCACCCA 27458 ||| | ||| || ||| || ||||||||||| || ||| || || | |||| Sbjct 10484 GTTGAGCTCTTCATAAATAGACTCGAGCGCGTCCAGCTTCTCGTTATGAATAAGCTCCCA 10425 Query 27459 TTCGTCGGTGCGCTCGCCGTCTTCGTCGACTTTATACACGGCCCCTGAAGCAAGCTGAAG 27518 || | || |||| ||||| ||||| ||| ||||| || ||||| | ||| | Sbjct 10424 GTCACCTGTCGGCTCACCGTCGGCGTCGGTCACATAAACGGCACCGGAAGCTATCTGCAA 10365 Query 27519 GCACTTAATAGTCTTCGACGCAGCGTTCGCCGCCTCCACAGTTCCGCT-TTCCAGTTCGG 27577 ||| ||| ||||| | ||| || || | || || || |||| || || || |||| Sbjct 10364 GCATTTAGCCGTCTTGGCCGCCGCATTAACGGCGTCGAC-TTTCCCCTCATCGAGATCGG 10306 Query 27578 CAAATAGCTCCGCTT--CGAACTGGTCATAAATCTTGCGGGCTTTCTTCGGCAGGTCCAC 27635 | || | |||| | | | |||||| | || | ||||| ||||||| || Sbjct 10305 CCTTCAG--CAGCTTCACCATATCGTCATAGACTTTTTGCGCTTTACGGGGCAGGTAGAC 10248 Query 27636 AACAACCGG-CGTATAGATTGGCTTGTCACATCCGAAGTATTCAGCCGCATCAACTGTGA 27694 | ||| || | || | || ||||| |||||||||| || ||| || || || | Sbjct 10247 CGGACGCGGAACTACA-ATCGCCTCTTCACAACCGAAGTATTTAGACGCGTCTACCGTCA 10189 Query 27695 GCGACACGTCGGACAGGCGTTGTTGTAT------TTCT-TTCTCGGAGTTCTTAAGCGGG 27747 |||| | ||||| || | ||||| |||| |||||| | || | | Sbjct 10188 GCGAGATGTCGGCCAATGCACGATGTATGCGCTGTTCTGATCTCGGCATGGGTA--TGAG 10131 Query 27748 GCGTGCTGCATAGTGAAGCTGCCAGGCTTAACAGGCTTGCTAATAAACCAGCGATCCGTG 27807 | | | || || | |||| | ||||| |||| | || | || || || Sbjct 10130 GTCTACGGCGTATT--TGCTGTC-GGCTT--TTTGCTTCGAGGTGAAATACCGGTCTTTG 10076 Query 27808 AATGC-CTTATAGCTACTGCCGAGGCGTTCGCCACCATCGACAAACCACGTCTGACCCCA 27866 || || | | || | |||| || || ||||| |||| | |||||| |||||||||| Sbjct 10075 AACGCGGTGAAAGAT-GTGCCCAGACGCGCGCCAGCATCTATAAACCAGTTCTGACCCCA 10017 Query 27867 CAGGTCTTTCAGTCCGTTTGGTGCGGGTGTGCCGGTTAGGTT-----AAT-CCAGCGCTT 27920 || || || || ||||||| ||||| || || |||| ||| ||| || | || Sbjct 10016 AAGATCCTTGAGCCCGTTTGTAGCGGGCGTACCCGTTAAGTTCCACCAATACCGGACTTT 9957 Query 27921 GACG------TGCTTGTGAGCAATCGCCGCCAGCGCACGGGCGCGCTTACTTCCCTGCTT 27974 |||| | ||| || || || | || ||||||||||| ||| ||| | Sbjct 9956 GACGCCTTTTTTCTTATGGGCGATTTTGCCAAGAGCACGGGCGCGTTTA-GACCCGCCAC 9898 Query 27975 GC-TTCGATAGCCTTTCAGCTTAGTCGATTCATCGGCAACCACGACCGTAAAGGGCCACT 28033 || |||| | || ||||| |||||||| |||||||| || || ||||||||||| | Sbjct 9897 GCGTTCGGAACGACTTAAGCTTTGTCGATTCGTCGGCAACGACAACGGTAAAGGGCCAAT 9838 Query 28034 CGTCGCCGCAATACTCAACAAGCCACTCAACTACATCATAGTTAATACAAACCACGTTAG 28093 |||| || || | || | ||| || | | ||| |||||| ||| ||||||||| Sbjct 9837 CGTCACCAAGGTATTGCACCAACCATTCTGCGATATCGTAGTTACAACACACCACGTTAT 9778 Query 28094 CGTCGCTCTCAAGCGCAGCGATGCGGTCCTTCT-CCGACCCAGTGCCATCTACTACCAGC 28152 | | | | || | | ||| | || | | ||| ||||| || || || || Sbjct 9777 CCTTACCGGCGAGTAC-TTGTTGCCGATAGGCTACTGGCCCGGTGCCGTCGACGACTTGC 9719 Query 28153 AAGGCGGGGAAGCGCCATTTTTCCTGCTCTGGGGGCCATGTACCGGACGCAACGCGCAGC 28212 | ||||| || | |||||| || |||||| |||||| || ||||||||||||||||| Sbjct 9718 AGTGCGGGAAACCCCCATTTGTCTTGCTCTCCGGGCCACGTCGCGGACGCAACGCGCAGC 9659 Query 28213 GGGGCCAGCACCAGTACGCGGTCCTCCTGGTTGGAC-AGGATGCCGGTCTGGAACATTTT 28271 || || ||||| || ||||| || | ||| | | || |||| ||| |||||| | Sbjct 9658 GGCGCGAGCACAAGGACGCGATCTT--TGG--GCCCGAGTTCGCCGCTCTTGAACATCTG 9603 Query 28272 ATTCAGTGCCCACATAGTCGCGCCGGTTTTGCCCGACCCCATTGTCGCCCATATATTGCA 28331 || || ||||||| || |||||||||||||| ||||| || || ||| |||||| Sbjct 9602 GTTTAGCGCCCACAGTGTGGCGCCGGTTTTGCCACTACCCATCGTGGCGTATAGATTGCA 9543 Query 28332 TCG 28334 || Sbjct 9542 GCG 9540 Score = 233 bits (258), Expect = 5e-57 Identities = 505/746 (68%), Gaps = 12/746 (2%) Strand=Plus/Minus Query 37037 TGCACCGATGCGGATCTGGATAACGAGCCGGTTGCGCTGTTCAGTAAGCACGACCCGATC 37096 |||||||| || ||| || || || ||| ||| |||||| |||| ||| |||||| Sbjct 1270 TGCACCGACGCCGATTTGATGAATGAACCGTCTGCCTTGTTCACTAAGAACGTGCCGATC 1211 Query 37097 ATCGAGGGGTTGATTAACTTTAAATCGACCTGGTATATGGCGGGCGAGTCGAATATCGGT 37156 || || ||||| | ||||| |||||| ||||| ||||||||| || || || || Sbjct 1210 ATTGATGGGTTTTTAAACTTCCGATCGACGTGGTACGCGGCGGGCGAATCAAACATAGGC 1151 Query 37157 AAGTCGTTCTATGTGCTGGGGCAGATGGGCGCGGTTGCCGCCGGTATCCCGTTTGGCGGT 37216 || ||||||| || || ||| |||| ||| || ||||| || || || |||| ||| Sbjct 1150 AAATCGTTCTTCGTCCTTGGGGCTATGGCCGCTGTCGCCGCTGGCATACCTTTTG-CGGG 1092 Query 37217 GC-GAAGGTCGTCCAGTCGCATTGCTTCTATTTCGATGCGGAAGGCGGCGAAGCCTCCAA 37275 || |||||| || | || |||||||||||| ||||||| ||||| ||||| || | Sbjct 1091 GCAGAAGGTTATCAAATCTCATTGCTTCTATCTCGATGCCGAAGGTGGCGAGAGTTCTCA 1032 Query 37276 CCAGCGTAAGGAGGCATTGCAGATCAAATACGAGCACGACCTGGACAAGCTGCACATTAT 37335 | | || |||| | ||||| || || | | ||||| | ||||||||| | Sbjct 1031 CTTAAGGAAACAGGCGCTCCAGATAAAGTATCAAGATGACCTCAATTGGCTGCACATAGT 972 Query 37336 CGACCTGCAATCACGCGGCTGGGATATCACCAGCAAGTCTGGCTTGCGCGAAGTTATCAG 37395 |||||| | |||||||| ||| | | ||| | ||| |||| || | | Sbjct 971 CGACCTCTCGGTATTGGGCTGGGACATCTCAACAAAGACCGGCAAGCGCCGGGTGACCGA 912 Query 37396 CTTTATCAATCGCAC---AGCTAACGGGGAGCCGGTTGGCCTGGTGGCATTCGACTCACT 37452 || ||| ||||| ||| | || || |||||| || | || |||||||| || Sbjct 911 CTACATC---CGCACGATAGCCCGTGAAGATCCTGTTGGCATGATAGCCTTCGACTCTCT 855 Query 37453 CAACCAGACTGTTGCGCTGCGGTCCGCCGATGCTAAACCATTTGACGAGAACAACGCCAG 37512 ||||||||| | || | || || |||| | || || || ||||| | ||| Sbjct 854 AAACCAGACTATGGCTTTACGCTCTTCCGACCTTCGGCCGTTCGATGAGAATAGCGCGGC 795 Query 37513 CGATATGGGTGAAGTGGTCAAAGCGTTAAAAGCCATCGCGGAAAACACAGGCGGCAGTGC 37572 |||||||| |||||||| || | |||| ||| | || ||||| || Sbjct 794 AGATATGGGGGAAGTGGTACGCGCCCTGAAAGAGATCTCTATCGCAACCGGCGGATCGGC 735 Query 37573 GGGCGTCATCCACCACCCGGCGAAAGGTGCAAACGGCAGCA-GAACCCCCCGCGGGTCCG 37631 |||||| | || |||||||| ||||| | | || || | | | ||||| |||| Sbjct 734 TGGCGTCGTTCATCACCCGGCAAAAGGGGGTGGC-GCGTCACGCTCTGCGCGCGGTTCCG 676 Query 37632 GTGCGCTTCATGGCGCTGTCGATTCTGCGTTCTTCCTGGAACAGCCGGA-CGACAACCAG 37690 | ||||| ||||| || || ||||| || || || | || ||||| || | | || || Sbjct 675 GCGCGCTGCATGGTGCAGTGGATTCGGCCTTTTTTATCGAGCAGCCTGATCCAGAATCA- 617 Query 37691 CCGGGGCAACTTAACCTTTATCACGAAAAATCACGTAACGGCATCAAGCAAGCGCCTCGT 37750 ||| || | || ||||||||||||||||| ||||||||| | |||||| |||| | Sbjct 616 ATGGGTAAAATCAATCTTTATCACGAAAAATCCCGTAACGGCGTGAAGCAATCGCCAAGG 557 Query 37751 GGCTTCGTCCTGCTCAAGTGCAAGGT 37776 |||||| | |||| || || || || Sbjct 556 GGCTTCCTGCTGCGAAAATGTAAAGT 531 Score = 221 bits (244), Expect = 3e-53 Identities = 488/727 (67%), Gaps = 16/727 (2%) Strand=Plus/Minus Query 30740 GGTCGTCGCTATACTCGCCGCGTGCCAGGTTTTGAGGCTGAAAGCCTTTACCGGCCCAGC 30799 |||||||| || | || ||||| || || || || ||||||||| || ||||| | Sbjct 7746 GGTCGTCGTGGTAATACCCACGTGCAAGATTCTGCGGTTGAAAGCCTCGCCCAGCCCATC 7687 Query 30800 GTAGCGTGCGCTTTGCGCCGCCATACTGGAGACACCCACGGCGGCGACCATCGGCGGATA 30859 ||| || ||||| ||||| ||||| || ||||| || ||||| || || |||||||| | Sbjct 7686 TTAGGGTTCGCTTGGCGCCACCATATTGAAGACAACCCCGGCGCCGGCCGTCGGCGGACA 7627 Query 30860 GACCATTCACAAGCGGATTGTACTTAGTCGATGCCGTTGATGACGCACCGAGGCGCATCT 30919 |||| | | ||| || ||||| || |||||||||||||| | || ||||||||||| | Sbjct 7626 GACCCTCGATAAGTGGCTTGTATTTTGTCGATGCCGTTGACGCTGCGCCGAGGCGCATTT 7567 Query 30920 CGATAAGCACTTTGCCTTCGTCGGGGAAGTCTGGGTCTTCAAGCAGGTCGTTAAGCGTG- 30978 | || | || | ||||||| |||| ||||| ||||| |||||||| ||| | Sbjct 7566 CAATGATAACGCGGGCTTCGTCTGGGAGATCTGGATCTTCTAGCAGGTC---CAGCAAGA 7510 Query 30979 --GATTTCTGTGCGTTGTGGATTGTGAACGCAGGCGCGAGGTCGCGCAGCGCGGGCAAGA 31036 | ||||| || || | | ||| ||| || || || |||||| || |||| || Sbjct 7509 CCGCCTTCTGGGCATTCGGTACGGTGTGCGCCGGGGCTAGACCGCGCAATGCCGGCAGGA 7450 Query 31037 AGTCATTGCCGGTTAG--CTTACCCCCGAAGCGCTCCCAGGCTTCTTCCTTCAATTCTTC 31094 | || ||||| || || | ||| | || || || | || | ||||| Sbjct 7449 AATCCGCACCGGTAAGACCTGA--GCCGTATTTGGCCATAGCCTCGGCTTTAAGTTCTTT 7392 Query 31095 CTTATGCGCTTGCACCGCTTTGATCGCGGCGTTCGCCAGGTCAACGTCCACGTAGAAGCC 31154 ||||||| | || | || | | |||| || || || || ||||| || || Sbjct 7391 CTTATGCTCCTGTATGGCCTGTACCGCGCAACGAGCAAGCTCGGTATCGACGTAAAACCC 7332 Query 31155 GCGGTCATTGATCAACTGGTCAATAAGCAGGATTTCGTCTTCCTTCGGCGTGTTGCCCCA 31214 |||||||| || | |||||||| | | ||| || ||| || |||| | ||| Sbjct 7331 TCGGTCATTAATGATCTGGTCAAGCACTAAGATCCGGTTTTCAATCTCCGTGGAGTTCCA 7272 Query 31215 GTCCGGTATGCGCCAATAGACTTCCCTCATAGCGATGATATCCAACGCGGCATAGCGCAG 31274 || | || | || | || | ||||| ||||||| | || ||| | Sbjct 7271 TGTTGGCAGTCGGTAGAAGGCCTCACGCATAGAAGTGATATCGCGCCGTGCGTAGTCTAC 7212 Query 31275 GAA---TTTGGCCCATTCTTCAGGGTGAGTCTCGCGGGTGTAGCGGCGGATTTTGTAGGT 31331 || ||| ||||||||| ||||| |||| |||||||| || || ||||| | Sbjct 7211 AAAGCGTTT---CCATTCTTCGGGGTGCGTCTGCTTTGTGTAGCGCCGTATCTTGTAATT 7155 Query 31332 CTTAGGGGTAGGCTTACAGAATCGTTTGATCAGCGCCTTGCCAGCCTTATCCTTCGCGTG 31391 |||||| || || |||||||| || | ||||| |||||| || |||||||| || ||| | Sbjct 7154 CTTAGGCGTGGGTTTACAGAAGCGCTGGATCAACGCCTTACCCGCCTTATCTTTGGCGAG 7095 Query 31392 ATCTGCGTCAACGCCCAGCACCTGGCACTGCATATCGAGACTACCCGGCAACGCGTGTCG 31451 || || |||| ||||| | ||| | | ||||| |||||||||||||| ||| Sbjct 7094 CTCCACGGGAACGTTTAGCACTTCGCAGAGTTTCTCGAGCGAACCCGGCAACGCGTATCG 7035 Query 31452 AAAGGCC 31458 ||||| Sbjct 7034 GTAGGCC 7028 Score = 86.0 bits (94), Expect = 2e-12 Identities = 139/200 (70%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 32332 CCTTCGATCTCGTCGCCTTCTACGGTCAGACCTTGTTCCGTCTGCTTCTCGCCGAGTGAC 32391 ||||||||||| || || | ||||| || ||| ||||||| ||||| ||| Sbjct 5506 CCTTCGATCTCATCATTGTCGATAGTCAGGCCAGATTCGGTCTGCTCTTCGCCCGTTGAA 5447 Query 32392 GTTTGAATGACCGGCTGTTTGAACGATTTGGCGTTGATGTACAACATGCCTTCGAATTCT 32451 ||| || |||||| ||||| || || |||||| ||| | |||| ||||| Sbjct 5446 GTTAAGATCCTCGGCTGCTTGAAGCGCTTAGCATTGATGATCAAAGCGTCTTCAAATTCA 5387 Query 32452 TCGGTTACTTCGTCGCGCTCGTCACCGTCGCGAACTGCGCATTCCTTAGAATCCTGGGCG 32511 || ||| ||||||| |||||||||||| || ||| || ||||| ||||| || Sbjct 5386 GGACTTGGTTCTTCGCGCTGGTCACCGTCGCGCACACAGCACTCTTTAGAGTCCTGTCCG 5327 Query 32512 TAGTGGCGGTCCATCCACTT 32531 || |||||||| | ||| || Sbjct 5326 TAATGGCGGTCAAACCATTT 5307 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 139618684361156