Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eutreta_20diana_20[genbank_20GCA_5F001015115.1_202015-05-29] 139,046 sequences; 233,053,157 total letters Query= NC_019927.1 Length=47611 Score E Sequences producing significant alignments: (Bits) Value seq81489 96.9 1e-15 >seq81489 Length=1574 Score = 96.9 bits (106), Expect = 1e-15 Identities = 138/192 (72%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 11791 GTGAAAGGGCACTTAAGCTCAAGCCCGCGGCCATCACTGCAAAGCCCGTCCGGTGAGCAT 11850 ||| |||||| || || ||||| ||||| ||||||||||| | || || |||||||| Sbjct 585 GTGTAAGGGCTTTTCAGTTCAAGGCCGCGTCCATCACTGCACATGCCATCAGGTGAGCAG 526 Query 11851 GCAGTGCGCATGGTTTCGTCCTTGTAGATAATCGGCGACTCGGTTACCTGAACGCCGGCA 11910 || || | | ||||||||||| || |||||| || | || | |||| | | Sbjct 525 GCGCACCGAAGCGAGTCGTCCTTGTAAATTATCGGCACATCCGAAACTTTAACGTCCGTT 466 Query 11911 GTAAATTCAAACAGGGCTCTTGCGTCATCCT-CGTATTGTTTGCCCCATGCCAGAGCCCT 11969 || ||||||||||| | || ||| | || || | | | ||| ||||||||||| | | | Sbjct 465 GTGAATTCAAACAGCGTTCGTGC-TGATGCTTCATGCTCTTTCCCCCATGCCAGGGGCTT 407 Query 11970 GGCATTAACTTC 11981 ||| ||||| || Sbjct 406 GGCGTTAACCTC 395 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 151982236256396