Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eutreta_20diana_20[genbank_20GCA_5F001015115.1_202015-05-29] 139,046 sequences; 233,053,157 total letters Query= NC_019929.1 Length=243050 Score E Sequences producing significant alignments: (Bits) Value seq133036 91.5 2e-13 seq8232 86.0 1e-11 >seq133036 Length=1169 Score = 91.5 bits (100), Expect = 2e-13 Identities = 124/173 (72%), Gaps = 0/173 (0%) Strand=Plus/Plus Query 122493 TGGTCACGACCAAAAAGGTTCACCTCCGCTCCATCATCCATGAGCTTCTGTGGTTCCTCA 122552 |||| || ||||| || ||| | || || ||||||||||| | || |||||||| | Sbjct 5 TGGTTACTACCAAGAAAACTCATTTGCGTTCAATCATCCATGAATTGCTTTGGTTCCTTA 64 Query 122553 TGGGCGATACCAACATCCAGTATCTGAAAGACAACAACGTCAGTATCTGGGATGAATGGG 122612 || || || |||||| |||| ||| |||| || || | || ||| ||||||| Sbjct 65 AAGGTGAAACTAACATCAAGTACCTGGAAGATAATGGGGTTAAGATTTGGCGGGAATGGG 124 Query 122613 CAGATGAAGATGGTAATCTCGGCCCGGTGTACGGTAAGCAATGGCGTGAGTGG 122665 ||||||| ||||| |||| || || || || || || |||||| ||| ||| Sbjct 125 CAGATGAGAATGGTGATCTAGGTCCAGTCTATGGCAAACAATGGGTTGACTGG 177 >seq8232 Length=24175 Score = 86.0 bits (94), Expect = 1e-11 Identities = 67/80 (84%), Gaps = 0/80 (0%) Strand=Plus/Plus Query 167024 TAGGGGCATAGCTCAGCTGGCAGAGCACCGGTCTCCAAAACCGGGTGTCCAAGGTTCGAA 167083 ||||||| |||||||| ||| |||||||||||||||||||||||||||| |||||| Sbjct 78 TAGGGGCGTAGCTCAGTTGGTAGAGCACCGGTCTCCAAAACCGGGTGTCGCGAGTTCGAG 137 Query 167084 TCCTTGTGCCCCTGCCAAAT 167103 || | |||||||||| || Sbjct 138 TCTCTCCGCCCCTGCCATAT 157 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 776280417261600