Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eutreta_20diana_20[genbank_20GCA_5F001015115.1_202015-05-29] 139,046 sequences; 233,053,157 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq43985 105 3e-18 >seq43985 Length=4878 Score = 105 bits (116), Expect = 3e-18 Identities = 93/116 (80%), Gaps = 0/116 (0%) Strand=Plus/Minus Query 25933 CATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTT 25992 |||||| | |||||||||||| | |||||||||||||||||| ||||| |||||| | Sbjct 1477 CATAAAAAGATCTGGAATCCATAATGCATAAAATAAATCTCTAGCTCTATGCTCTTCTGT 1418 Query 25993 TCCGTGATTCTTTTTTAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTA 26048 || ||| || |||| ||| || || ||||| ||||||| ||||||||||||| Sbjct 1417 GCCAGTATTTTTCTTTAAATCCAAAAATTCAAATATATCTGCATGCCATGGTTCTA 1362 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 252611192564450