Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eutreta_20diana_20[genbank_20GCA_5F001015115.1_202015-05-29] 139,046 sequences; 233,053,157 total letters Query= NC_020851.1 Length=208007 Score E Sequences producing significant alignments: (Bits) Value seq112631 159 5e-34 >seq112631 Length=3207 Score = 159 bits (176), Expect = 5e-34 Identities = 231/323 (72%), Gaps = 10/323 (3%) Strand=Plus/Plus Query 47755 TCCTCAACAAACTGACGGACAGAATATTGATTTC--CTGTGGCAATAACAAAATCATCAG 47812 ||||||||||||| ||| ||| ||| |||| | || ||||| |||||||| ||| Sbjct 812 TCCTCAACAAACTCACGCACAC--TATGCGTTTCACCGGTTGCAATGACAAAATCTGCAG 869 Query 47813 GTTCTTCTTGTTGAAGCATTAACCACATAGCCTCGACATAATCTCTGGCATGTCCCCAGT 47872 | | ||| | ||| ||||| | |||||||||||| |||||||| ||||||| ||||| | Sbjct 870 GCTTTTCGTATTGCAGCATCATCCACATAGCCTCTACATAATCCATGGCATGGCCCCAAT 929 Query 47873 CACGAAGTGCATCAAGATTTCCTAGATATAAACAGTC---TTGCTTACCTTCAGAGATTG 47929 |||| | ||| | ||| || | | || | || ||| | | | | | ||| Sbjct 930 CACGTTTCGAATCCAAATTGCCCAATTCAAAGTATTCCAATTGTTGA---TGAAATATTT 986 Query 47930 CTTTTAATGCTCTTGTAATCTTACGAGTTACAAAAGTTTCACCACGTCTTGGAGATTCAT 47989 || || | |||||| || || ||||||||| |||||||||||| ||| ||||||| Sbjct 987 TCGCTACTGAACGTGTAATTTTGCGTGTTACAAAATTTTCACCACGTCGTGGTGATTCAT 1046 Query 47990 GATTAAAAAGAATACCACTACAGGCATACATTCCGTATGATTCACGATAGTTCTTTACTA 48049 ||||||| || |||||| | ||||| |||| ||| | ||||| || || |||| Sbjct 1047 GATTAAATAGTATACCATTGCAGGCGAACATATTGTAAGCCTCACGGTAATTGACAACTA 1106 Query 48050 TCCAGTACCCATAGAGTTTTGCA 48072 ||||| | ||||| | ||| ||| Sbjct 1107 TCCAGAAACCATACATTTTAGCA 1129 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 664337720820720