Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eutreta_20diana_20[genbank_20GCA_5F001015115.1_202015-05-29] 139,046 sequences; 233,053,157 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq43985 113 5e-20 >seq43985 Length=4878 Score = 113 bits (124), Expect = 5e-20 Identities = 299/453 (66%), Gaps = 8/453 (2%) Strand=Plus/Plus Query 75614 GAACCATGGCATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGAC-GA 75672 |||||||||||||| ||||| | || || | || ||| | || | | || || Sbjct 1364 GAACCATGGCATGCAGATATATTTGAATTTTTGGATTTAA-AGAAAAATACTGGCACAGA 1422 Query 75673 AGAGGCTCGGTGTAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCG 75732 |||| | | ||||||| | |||| | | ||||||||||| ||||| ||||| || Sbjct 1423 AGAGCATAGAGCTAGAGATTTATTTTATGCATTATGGATTCCAGATCTTTTTATGAAACG 1482 Query 75733 GGTTGAGGAGGGTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGA 75792 ||||| | || | ||||| ||| | |||||| ||||| || || || | Sbjct 1483 TGTTGAAGCTAATGAAGATTGGTCGCTTATGTGTCCACACAAGTGTCCCGG---CTTGCA 1539 Query 75793 CGCGGT---GGGTGAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGC 75849 | ||| ||| || || |||||| | || || || ||||| | || || | || Sbjct 1540 TGAGGTATGGGGCGATGAATTTGAAAAATTATATACTAAATATGAGCAAGACGGACGCGC 1599 Query 75850 CAATGCGACTGTACCAGCCGCCGATGTTTGGAAGGCTATTCTCAAATCACAGACGGAGAC 75909 ||| || ||| ||| | ||||| || ||| | |||| || ||||| Sbjct 1600 TAATAAGAAAGTAAAAGCACAAAGTCTTTGGTTTGCCATTATTGAATCGCAAGTAGAGAC 1659 Query 75910 TGGAACACCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTT 75969 || |||||||||||||| ||||||||||| ||||| | |||||||| ||| | ||| | Sbjct 1660 AGGCACACCATATATGCTGTACAAGGATGCATGTAATAGAAAGAGTAATCAACAAAATAT 1719 Query 75970 GGGAACAATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGA 76029 || || || || | ||| | || || ||||| | ||||| ||| ||||| Sbjct 1720 TGGCACTATTAAATGTAGTAATTTATGTACAGAAATAGTTGAGTATTCAGCACCAGATGA 1779 Query 76030 GACGGCTGTTTGCAATTTGGCATCAATCGCCCT 76062 ||||||||| ||||| ||||| || || || Sbjct 1780 AGTGGCTGTTTGTAATTTAGCATCGATTGCACT 1812 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595532717292480