Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eutreta_20diana_20[genbank_20GCA_5F001015115.1_202015-05-29] 139,046 sequences; 233,053,157 total letters Query= NC_021299.1 Length=80955 Score E Sequences producing significant alignments: (Bits) Value seq14905 407 8e-109 >seq14905 Length=119551 Score = 407 bits (450), Expect = 8e-109 Identities = 672/978 (69%), Gaps = 43/978 (4%) Strand=Plus/Minus Query 59266 GCCATCAACTGGAACCGCGTCTTTGACGACAAGGATCTTGAGGTCTGGAACCGGTTGACC 59325 ||||| ||||||||| || |||||||| ||||| ||||| |||||||| ||||| Sbjct 7442 GCCATTAACTGGAACAAGATCCAGGACGACAAAGATCTCGAGGTGTGGAACCGTCTGACC 7383 Query 59326 AACAACTTCTGGCTGCCAGAGAAGATCCCTGTCTCCAACGACATCCCGGCCTGGGGCACG 59385 ||| ||||||||||| || ||| |||| | ||||||||||| || |||||| ||| Sbjct 7382 TCCAATTTCTGGCTGCCGGAAAAGGTCCCATTATCCAACGACATTCCTTCCTGGGCGACG 7323 Query 59386 CTGACGGAGGAAGAGCAAGTCCTCACGATGCGGGTCTTCACCGGCCTGACGATGCTCGAC 59445 |||| | ||||| | || || || || || ||||||||||||||| ||||||| Sbjct 7322 CTGAGCGCCAAAGAGAAGCAGCTGACAATTCGCGTGTTCACCGGCCTGACGCTGCTCGAT 7263 Query 59446 ACGATCCAGGGCACCGTGGGTGCTGTGAGCCTGATCCCTGACGCGATCACGCCGCACGAG 59505 ||| | ||| || || || || | ||||| ||||| |||| ||||| ||| Sbjct 7262 ACGGTGCAGAACATTGTCGGCGCGCCCACGCTGATGAAAGACGCCGTCACCCCGCATGAG 7203 Query 59506 GAGGCGGTGTACACGAACATCGCGTTCATGGAGTCGGTGCACGCGAAGAGCTACAGCAAC 59565 |||||||| ||| |||| ||| ||||||||| |||||||||| |||||| Sbjct 7202 GAGGCGGTTTACTCGAATATCTGCTTCATGGAGGCGGTGCACGCACGCTCCTACAGTTCG 7143 Query 59566 ATCTTCTCGACGCTGTGCTCGTCCAAGGAGATCGACGCGGCGTTCCGCTGGTCGGAGGAG 59625 || ||||||||||||||| | | ||| | |||| || | |||||| ||||| Sbjct 7142 ATTTTCTCGACGCTGTGCATGACTTCGGACGTTGACGACGCTTATCGCTGGAGTGAGGAA 7083 Query 59626 AA---TCCGAACCTGCAACGCAAGGCTCAGATCGTCCTGGACTACTACCAGGGTGACGAT 59682 || | || |||||| |||||| ||| |||| |||||| | || || ||| Sbjct 7082 AACGTTGCG---CTGCAAAACAAGGCCGCGATTATCCTCTCTTACTACAACGGCGAAGAT 7026 Query 59683 CCGCTGAAGCGGAAGGTGGCCTCGACGTTGCTGGAGGGGTTCCTGTTCTACTCGGGCTTC 59742 ||| ||| | ||| || ||| ||| |||||| ||||||||||| ||||||||| Sbjct 7025 CCGTTGATGAAGAAAGTCGCCAGCGTGTTCCTGGAGTCATTCCTGTTCTATTCGGGCTTC 6966 Query 59743 TACCTGCCGATGTACTGGTCTAGTCGGGGGAAGCTGACGAACACGGCCGACATGATCCGG 59802 || ||||| ||||||||||| || || | |||||||| ||||| ||||| |||| || Sbjct 6965 TATCTGCCAATGTACTGGTCGAGCCGCGCCAAGCTGACCAACACCGCCGATCTGATTCGT 6906 Query 59803 CTCATCATTCGTGACGAGGCGGTGCACGGCTACTACATCGGATACAAGTTCCAGCGC--- 59859 || |||||||||||||| ||||||||||| |||||||| || ||||| ||||| | Sbjct 6905 CTGATCATTCGTGACGAAGCGGTGCACGGTTACTACATTGGCTACAAATTCCAACANNNN 6846 Query 59860 ---------------------------------GGCCTGGAGAC-TCAGAACGAGGCTCG 59885 ||| | || || | ||| ||||| || Sbjct 6845 NNNNNNNNNNNNNNNNNNNNNNNNNNNNCAACAGGCGTTGAAACTTGAGAGCGAGGAGCG 6786 Query 59886 CCGCGAGGAGCTGAAGGACTACACGTACGGTCTGCTACTCGAGTTGTACGACAACGAGAT 59945 | | || | ||||| | ||| | ||| | | || |||| |||||||| || Sbjct 6785 TCAAAGGCAGGTTAAGGATCAGGCGTTTGACCTGATTCAGGACCTGTATGACAACGAAAT 6726 Query 59946 TGAGTACACGCAGGATCTGTACGACGGCGTGGGACTGACTGAGGATGTCAAGATGTTCCT 60005 | || || | || ||||| ||||| ||||| || ||||| || |||| ||||| Sbjct 6725 TCGCTATACCGAAGAGCTGTATGACGGTGTGGGTTGGAGCGAGGACGTTAAGAAATTCCT 6666 Query 60006 GCGCTACAACGCCAACAAGGCGCTGATGAATCTCGGCTACGAGGCGCTGTTCCCGCGCGA 60065 || |||||||| || || ||||||||||| | || ||||||||||||||||| | Sbjct 6665 GCATTACAACGCTAATAAAGCGCTGATGAACTTGGGTTACGAGGCGCTGTTCCCAGCCAG 6606 Query 60066 CGAAACCGAGGTGAATGCGGCGATCTTGGCGGCACTGTCCCCTGGCGGGGACGAGAACCA 60125 | | || || || |||| || || ||||| | || || || || || ||||| Sbjct 6605 CATGGCGGAAGTTAACCCGGCAATTCTGTCGGCATTATCGCCAAACGCCGATGAAAACCA 6546 Query 60126 CGACTTCTTCTCGGGCTCTGGCAGCACGTATGTGATTGGCAAGGCTGAGGTTACGGAAGA 60185 |||||||||||| || || ||| | || || ||||| || || | ||| ||||| Sbjct 6545 CGACTTCTTCTCAGGTTCCGGCTCTTCTTACGTTATTGGTAAAGCGGTCAATACCGAAGA 6486 Query 60186 CGAGGATTGGGACTTCTA 60203 |||||| ||||| ||||| Sbjct 6485 CGAGGACTGGGATTTCTA 6468 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 258492409200696