Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eutreta_20diana_20[genbank_20GCA_5F001015115.1_202015-05-29] 139,046 sequences; 233,053,157 total letters Query= NC_021529.2 Length=247511 Score E Sequences producing significant alignments: (Bits) Value seq38357 89.7 8e-13 >seq38357 Length=36386 Score = 89.7 bits (98), Expect = 8e-13 Identities = 172/249 (69%), Gaps = 6/249 (2%) Strand=Plus/Plus Query 171957 TAAAGAAAACGCGAATAAAGACTCGAAAGTGATCCCTACAATGCGTGACTTGGTAGCAGG 172016 ||| |||||||| ||||| ||| ||||| || || ||| ||| ||| || | || || Sbjct 27081 TAATGAAAACGCCAATAAGGACAGCAAAGTCATTCCCACACAGCGCGACCTGCTGGCGGG 27140 Query 172017 TACAGTTGCGAAACAATACGCACTCGAAGACTTTCTACCGAAGCACAT--TGCAGAAGCA 172074 | || |||||||| || || | | | |||| || || | ||| | || Sbjct 27141 GATTGTAGCGAAACACTATGCGCGTCAGCATATTCTGCCTCGTGACGTGGTGCTG--GCC 27198 Query 172075 CATATAAGTGGCGATATTCATTTTCATGATTTAGATTACAGTCCATTATTTCCGCAATTC 172134 || | ||||| ||||||| ||| ||| | || ||| || || || ||| ||| Sbjct 27199 CACGAGCGCGGCGAAATTCATTATCACGATCTCGACTACTCACCGTTTTTCCCGATGTTC 27258 Query 172135 AACTGTATGCTTATTGATATCAAAGGCATGCTTGAA-AACGGATTTAAAATGGGTAATGC 172193 ||||| ||||| || || ||||||||||| ||||| || || ||||||||||| || || Sbjct 27259 AACTGCATGCTCATCGACCTCAAAGGCATG-TTGAATAAAGGTTTTAAAATGGGCAACGC 27317 Query 172194 TGAGATCGA 172202 || ||||| Sbjct 27318 GGAAATCGA 27326 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 790530805893360