Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Eutreta_20diana_20[genbank_20GCA_5F001015115.1_202015-05-29] 139,046 sequences; 233,053,157 total letters Query= NC_021531.1 Length=223989 Score E Sequences producing significant alignments: (Bits) Value seq973 159 5e-34 >seq973 Length=41428 Score = 159 bits (176), Expect = 5e-34 Identities = 294/425 (69%), Gaps = 12/425 (3%) Strand=Plus/Plus Query 87552 ATCTTCGCCACCGGCGAAGCGGGGTGTGGGAAAACGTTTATTTCCGCCGCATACGCTTGC 87611 || || ||||| |||||||| || ||||| ||||||||||| ||| || | || Sbjct 35709 ATTTTTGCCACAGGCGAAGCAGGTTGTGGCAAAACGTTTATCAGCGCTGCGAAAGCGGCA 35768 Query 87612 GAACGTTTGCTGGCCAAAGATATCGAACGTATCATCGTCACTCGTCCGGTGCTCTCCGCA 87671 || || | |||||| || || | || || || ||||| ||||| || || Sbjct 35769 GAGGCGTTAATTCACAAAGAGATAGACAGGATTATAGTGACTCGCCCGGTACTGCAGGCC 35828 Query 87672 GATGAAGATTTAGGCTTCCTGCCCGGCGACGTTGCCGAAAAATTCGCCCCGTACTTCCGC 87731 ||||||||| | || ||| |||| || || || | || ||||| || || || ||| | Sbjct 35829 GATGAAGATCTCGGTTTCTTGCCTGGGGATATTTCAGAGAAATTTGCTCCTTATTTCAGG 35888 Query 87732 CCTGTTTATGACGTTCTTCAAAAACGTCTCGGTAGCCGCTACCT----GCAATACTGCCT 87787 || ||||| ||| |||| ||| | || | || ||| ||| || || || Sbjct 35889 CCAGTTTACGACATTCTCGTTCGTCGTTTGGG----CTCTTCCTTTATGCAGTATTGTCT 35944 Query 87788 TAAGCCCGGTATCGACAAAGTGGAGATTGCTCCTTTTGCGTACATGCGTGGCCGCAGTTT 87847 || | || | || || || ||||| || ||||| || |||||||| || | ||| Sbjct 35945 GCGACCGGAAATAGGGAAGGTAGAAATTGCGCCATTTGCCTATATGCGTGGGCGTACTTT 36004 Query 87848 CGAAAATGCGGTTGTCATTTTAGATGAAGCTCAGAACACTACTGCTCAG-CAGATGAAGC 87906 |||||||||||| || ||| | |||||||| |||||| || || ||| |||||||| Sbjct 36005 CGAAAATGCGGTGGTGATTCTGGATGAAGCCCAGAACGTCACAGC-CAGTCAGATGAAAA 36063 Query 87907 TCTTCCTGACACGTATCGGGGAGAACTGT-ATCGTTATCGTAAACGGTGACGTCACACAG 87965 | |||||||| ||| |||| || || ||| | || || || ||||| || ||||| ||| Sbjct 36064 TGTTCCTGACCCGTCTCGGTGA-AAATGTGACGGTGATAGTCAACGGGGATGTCACCCAG 36122 Query 87966 TGCGA 87970 ||||| Sbjct 36123 TGCGA 36127 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 715391231493840